RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TMEM105Q8N8V8 129 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 ESR2Q92731 530 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 AZI2Q9H6S1 392 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 RBM28Q9NW13 759 aaKnown RBP4.53□□□□□ -1.68
HERC4-213ENST00000506515 SENP1Q9P0U3 644 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 SLC2A6Q9UGQ3 507 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 DUSP12Q9UNI6 340 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 KIF3AQ9Y496 699 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 PKD1L2Q7Z442 2459 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 FAM208BQ5VWN6 2430 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 A8MX80 341 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 BCL2L11O43521 198 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 ANP32DO95626 131 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 CHRNA1P02708 482 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 SLC35E2P0CK97 266 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 RDXP35241 583 aaKnown RBP4.52□□□□□ -1.69
HERC4-213ENST00000506515 ALDH3B2P48448 385 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 EMDP50402 254 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 PUDPQ08623 228 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 KLHL30Q0D2K2 578 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 ALX1Q15699 326 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 DCAF4L1Q3SXM0 396 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 HSDL1Q3SXM5 330 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 USH1GQ495M9 461 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 TMEM41BQ5BJD5 291 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 MEDAGQ5VYS4 303 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 ASPHD2Q6ICH7 369 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 GCNT7Q6ZNI0 430 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 CENPUQ71F23 418 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 CENPLQ8N0S6 344 aaPredicted RBP4.52□□□□□ -1.69
HERC4-213ENST00000506515 Q8N9G6 341 aaPredicted RBP4.52□□□□□ -1.69
HERC4-213ENST00000506515 TAAR1Q96RJ0 339 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 CCT8L2Q96SF2 557 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 HCAR1Q9BXC0 346 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 MRPL13Q9BYD1 178 aaKnown RBP4.52□□□□□ -1.69
HERC4-213ENST00000506515 COMMD4Q9H0A8 199 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 TMEM117Q9H0C3 514 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 SLC25A51Q9H1U9 297 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 WDR76Q9H967 626 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 POLD4Q9HCU8 107 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 PXMP2Q9NR77 195 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 SLC35D1Q9NTN3 355 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 SH3BGRL2Q9UJC5 107 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 ANGPTL2Q9UKU9 493 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 DDX19BQ9UMR2 479 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 KMT2EQ8IZD2 1858 aa4.52□□□□□ -1.69
HERC4-213ENST00000506515 CFAP47Q6ZTR5 3102 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 BAHCC1Q9P281 2608 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 JAK2O60674 1132 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 SLC2A10O95528 541 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 LGALS2P05162 132 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 PDHBP11177 359 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 PGAM2P15259 253 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 PTMSP20962 102 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 PTBP1P26599 531 aaKnown RBP eCLIP4.51□□□□□ -1.69
HERC4-213ENST00000506515 FNTAP49354 379 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 CAMK4Q16566 473 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 Q1RN00 199 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 FAM74A3Q4VXF1 159 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 SLC25A30Q5SVS4 291 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 ATAD3CQ5T2N8 411 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 SCYL2Q6P3W7 929 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 CYS1Q717R9 158 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 MCOLN2Q8IZK6 566 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 VN1R2Q8NFZ6 395 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 TFB1MQ8WVM0 346 aaKnown RBP4.51□□□□□ -1.69
HERC4-213ENST00000506515 C18orf25Q96B23 403 aaPredicted RBP4.51□□□□□ -1.69
HERC4-213ENST00000506515 PPP1R16AQ96I34 528 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 TMEM121Q9BTD3 319 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 DHX33Q9H6R0 707 aaKnown RBP4.51□□□□□ -1.69
HERC4-213ENST00000506515 EXOSC3Q9NQT5 275 aaKnown RBP4.51□□□□□ -1.69
HERC4-213ENST00000506515 RGS18Q9NS28 235 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 B9D1Q9UPM9 204 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 EIF3LQ9Y262 564 aaKnown RBP4.51□□□□□ -1.69
HERC4-213ENST00000506515 NAALAD2Q9Y3Q0 740 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 PLXNA3P51805 1871 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 COL4A4P53420 1690 aaPredicted RBP4.51□□□□□ -1.69
HERC4-213ENST00000506515 CEP250Q9BV73 2442 aa4.51□□□□□ -1.69
HERC4-213ENST00000506515 TTC41PQ6P2S7 1318 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 DNAH14Q0VDD8 3507 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 MBLAC1A4D2B0 266 aaPredicted RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 ZSCAN5BA6NJL1 495 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 MAPK13O15264 365 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 NOL3O60936 208 aaKnown RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 PEX11AO75192 247 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 THY1P04216 161 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 KRT6BP04259 564 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 ZNF286BP0CG31 522 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 CT45A10P0DMU9 189 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 KRT13P13646 458 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 XRCC1P18887 633 aaPredicted RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 KIF5BP33176 963 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 RPL4P36578 427 aaKnown RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 KRT6CP48668 564 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 NOVA1P51513 510 aaKnown RBP4.5□□□□□ -1.69
HERC4-213ENST00000506515 OVGP1Q12889 678 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 CHI3L2Q15782 390 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 CBLN3Q6UW01 205 aa4.5□□□□□ -1.69
HERC4-213ENST00000506515 LANCL3Q6ZV70 420 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms