RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ZNF33AQ06730 810 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZFP36L1Q07352 338 aaKnown RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 RIPPLY1Q0D2K3 151 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ARL16Q0P5N6 197 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 SCRN3Q0VDG4 424 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 GAGE5Q13069 117 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 GAGE6Q13070 117 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 SNTA1Q13424 505 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 LAGE3Q14657 143 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 TMEM52BQ4KMG9 183 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 VWA2Q5GFL6 755 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 PXDC1Q5TGL8 231 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 STUMQ69YW2 141 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF836Q6ZNA1 936 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 MOB2Q70IA6 237 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 PTF1AQ7RTS3 328 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 PRSS48Q7RTY5 328 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 PID1Q7Z2X4 250 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 IFNEQ86WN2 208 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF547Q8IVP9 402 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 SLC22A15Q8IZD6 547 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 BPIFB2Q8N4F0 458 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 METTL27Q8N6F8 245 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 CSNK1A1LQ8N752 337 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF565Q8N9K5 539 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 GATSQ8NAP1 163 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF248Q8NDW4 579 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR5T2Q8NGG2 359 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR13A1Q8NGR1 328 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 C16orf52Q8NHV5 167 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 LYPD6BQ8NI32 183 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 CAPSLQ8WWF8 208 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ACOT11Q8WXI4 607 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 TNFRSF14Q92956 283 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 NAT6Q93015 286 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ISOC2Q96AB3 205 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 MRGPRFQ96AM1 343 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 FAF2Q96CS3 445 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF486Q96H40 463 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ST6GAL2Q96JF0 529 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 RBM4BQ9BQ04 359 aaKnown RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 C7orf50Q9BRJ6 194 aaKnown RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 NIPSNAP3BQ9BS92 247 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 CABLES2Q9BTV7 478 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR52A5Q9H2C5 316 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 HIPK2Q9H2X6 1198 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 RBKSQ9H477 322 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 FNDC4Q9H6D8 234 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 NT5DC2Q9H857 520 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 SP140LQ9H930 580 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ANKHQ9HCJ1 492 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 GPATCH2LQ9NWQ4 482 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 MS4A12Q9NXJ0 267 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 ABCD2Q9UBJ2 740 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 PSMD13Q9UNM6 376 aa3.13□□□□□ -1.91
HMGB1P22-201ENST00000505315 PLEKHH1Q9ULM0 1364 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ATP10AO60312 1499 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 IGHV4OR15-8A0A075B7B6 117 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 KCNE1BA0A087WTH5 132 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 IGHV2-70DA0A0C4DH43 119 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 A0A1B0GUS0 222 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 A0A1W2PPV9 198 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 E7ESA3 106 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TFECO14948 347 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TM9SF1O15321 606 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 SCN2BO60939 215 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TRMUO75648 421 aaKnown RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CDC123O75794 336 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 UGT2B17O75795 530 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CT62P0C5K7 136 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR9G9P0C7N8 305 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 FRMD6-AS1P0C7T7 363 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 MGMTP16455 207 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF20P17024 532 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 SDC1P18827 310 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 BCL3P20749 454 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 SERPINA2P20848 420 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CFHR2P36980 270 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 MAP3K8P41279 467 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 DAP3P51398 398 aaKnown RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CCNHP51946 323 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ATP12AP54707 1039 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 GSCP56915 257 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 UBE2KP61086 200 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 LTBQ06643 244 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 Q0VFX4 171 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ST3GAL3Q11203 375 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ITPK1Q13572 414 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TSC22D1Q15714 1073 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CD226Q15762 336 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 FAM189A2Q15884 450 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF77Q15935 545 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 DUSP7Q16829 419 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 C18orf21Q32NC0 220 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 OGFOD2Q6N063 350 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ADAMTSL5Q6ZMM2 481 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF627Q7L945 461 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CEACAM19Q7Z692 300 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms