RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 MDFIC2A0A1B0GVS7 189 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SERTM1A2A2V5 107 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 A8MV72 311 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SULT2B1O00204 365 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 S1PR4O95977 384 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 TCL1AP56279 114 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 EIF3IQ13347 325 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 DOC2AQ14183 400 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 TMEM244Q5VVB8 128 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR5D16Q8NGK9 328 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 LCN9Q8WX39 176 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 DDX1Q92499 740 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 APOLD1Q96LR9 279 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR5B2Q96R09 309 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NMES1Q9C002 83 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SEC61A2Q9H9S3 476 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 MANBALQ9NQG1 85 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ADARB2Q9NS39 739 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZDHHC3Q9NYG2 299 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 RNF11Q9Y3C5 154 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 TRBV2A0A0J9YWF9 115 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 GABRPO00591 440 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CSTBP04080 98 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SFTPCP11686 197 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NCK1P16333 377 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 RAB33AQ14088 237 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ABI3BPQ7Z7G0 1075 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ADGRE4PQ86SQ3 457 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 WDR5BQ86VZ2 330 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CHST4Q8NCG5 386 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR5L2Q8NGL0 311 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CSNK1G1Q9HCP0 422 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PDE7BQ9NP56 450 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SLC35D1Q9NTN3 355 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 EPXP11678 715 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 AMY2BP19961 511 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 C21orf58P58505 322 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SLC8B1Q6J4K2 584 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FIBINQ8TAL6 211 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 UBA3Q8TBC4 463 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NUDCD2Q8WVJ2 157 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 GPR174Q9BXC1 333 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 MMP28Q9H239 520 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 GSTO2Q9H4Y5 243 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PARD6AQ9NPB6 346 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 LACTBL1A8MY62 500 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ANKRD63C9JTQ0 380 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 YY2O15391 372 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 DOK2O60496 412 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SNCGO76070 127 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 AMY2AP04746 511 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NKX2-5P52952 324 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 AMZ1Q400G9 498 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SULF2Q8IWU5 870 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 A0A0U1RQJ8 604 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF891A8MT65 544 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 TERTO14746 1132 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ARPC1BO15143 372 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CTSLP07711 333 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 HOXD11P31277 338 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FAM26DQ5JW98 314 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FJX1Q86VR8 437 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CBARPQ8N350 705 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ARL14EPQ8N8R7 260 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR5A2Q8NGI9 324 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 KCNJ15Q99712 375 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NICN1Q9BSH3 213 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR51I1Q9H343 314 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FGF20Q9NP95 211 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NDUFS6O75380 124 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 GOT2P00505 430 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PRF1P14222 555 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF43P17038 809 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 POLR2HP52434 150 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 RIDAP52758 137 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PJVKQ0ZLH3 352 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 RPL7L1Q6DKI1 246 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SNX29P2Q8IUI4 249 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SLC35F2Q8IXU6 374 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF619Q8N2I2 560 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ARHGEF39Q8N4T4 335 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CISD2Q8N5K1 135 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR5M9Q8NGP3 310 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR6N1Q8NGY5 312 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 LKAAEAR1Q8TD35 194 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PMEPA1Q969W9 287 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF764Q96H86 408 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 RAB18Q9NP72 206 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 KIAA1522Q9P206 1035 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 GRHPRQ9UBQ7 328 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PRODH2Q9UF12 536 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PHLPP1O60346 1717 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CLDN34H7C241 214 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 RNGTTO60942 597 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NUDT3O95989 172 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FBLN1P23142 703 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ABCD3P28288 659 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SRP14P37108 136 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CAV3P56539 151 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms