RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 GLAP06280 429 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 EPHA2P29317 976 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MESP2Q0VG99 397 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MED25Q71SY5 747 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 TSEN54Q7Z6J9 526 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 COMMD7Q86VX2 200 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MARCH9Q86YJ5 346 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ZNF563Q8TA94 476 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 METTL21AQ8WXB1 218 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MMABQ96EY8 250 aaPredicted RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SAMD8Q96LT4 415 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 OPALINQ96PE5 141 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CNN2Q99439 309 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 UBQLN3Q9H347 655 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ZBTB20Q9HC78 741 aaPredicted RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ATP13A2Q9NQ11 1180 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 UFSP2Q9NUQ7 469 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ABRACLQ9P1F3 81 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SERINC4A6NH21 518 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 XKRYO14609 159 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 TXNL1O43396 289 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 ORC5O43913 435 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 IL33O95760 270 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 DHFRP00374 187 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 IFNA7P01567 189 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 PPICP45877 212 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 DUSP3P51452 185 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 HSD11B2P80365 405 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 MRPS10P82664 201 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 PCM1Q15154 2024 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 FAM189A2Q15884 450 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 PRTGQ2VWP7 1150 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 LRIT3Q3SXY7 679 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 C14orf28Q4W4Y0 310 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 KLHL26Q53HC5 615 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 LIPKQ5VXJ0 399 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 DESI1Q6ICB0 168 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 WDR88Q6ZMY6 472 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 CCDC71Q8IV32 467 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 LILRB2Q8N423 598 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 PARP16Q8N5Y8 322 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 NEIL3Q8TAT5 605 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 WNT16Q9UBV4 365 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 KIAA0100Q14667 2235 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 TMEM229AB2RXF0 380 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 LMO7DNF2Z398 122 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 CYR61O00622 381 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 SCAMP1O15126 338 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 OR2T1O43869 369 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 LDOC1O95751 146 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 RAB3BP20337 219 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 RFX3P48380 749 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 FZD2Q14332 565 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 FGFBP1Q14512 234 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 CLEC12AQ5QGZ9 265 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 QSOX2Q6ZRP7 698 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 CPOQ8IVL8 374 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 TEX19Q8NA77 164 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 OR10H4Q8NGA5 316 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 OR5L2Q8NGL0 311 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 TMEM43Q9BTV4 400 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 TAPBPLQ9BX59 468 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 HDHD2Q9H0R4 259 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 TXNL4BQ9NX01 149 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 WRBO00258 174 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 KCNK2O95069 426 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 GP1BBP13224 206 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 FBLP22087 321 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 CXCR1P25024 350 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 IGLV3-21P80748 117 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 SELENBP1Q13228 472 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 RPL22L1Q6P5R6 122 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 Q6ZPB1 254 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 CCDC190Q86UF4 302 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 MFSD4AQ8N468 514 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 ARL14Q8N4G2 192 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 SPEM1Q8N4L4 309 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 ARL6IP6Q8N6S5 226 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 UXS1Q8NBZ7 420 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 RBM14Q96PK6 669 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 ACTR6Q9GZN1 396 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 COMMD4Q9H0A8 199 aa6.85□□□□□ -1.31
PDGFC-203ENST00000502773 PPIL3Q9H2H8 161 aaKnown RBP6.85□□□□□ -1.31
PDGFC-203ENST00000502773 SLC9B1P1A6NJY1 282 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 ARPC3O15145 178 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 DNAJB6O75190 326 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 RDH16O75452 317 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 MT-ATP6P00846 226 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 IGHA1P01876 353 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 ELAVL1Q15717 326 aaKnown RBP6.84□□□□□ -1.31
PDGFC-203ENST00000502773 LEXMQ3ZCV2 418 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 CCDC157Q569K6 752 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 PAN3Q58A45 887 aaKnown RBP6.84□□□□□ -1.31
PDGFC-203ENST00000502773 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-203ENST00000502773 AADACL4Q5VUY2 407 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 ACSM5Q6NUN0 579 aa6.84□□□□□ -1.31
PDGFC-203ENST00000502773 HAGHLQ6PII5 290 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-203ENST00000502773 LRRN1Q6UXK5 716 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms