RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 OR5B17Q8NGF7 314 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 DLX4Q92988 240 aaPredicted RBP4.89□□□□□ -1.63
NEDD4-203ENST00000502612 TOMM40LQ969M1 308 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 SNF8Q96H20 258 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 TTC25Q96NG3 672 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 ZIM3Q96PE6 472 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 FAM173AQ9BQD7 235 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 C11orf70Q9BRQ4 267 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 GOLPH3Q9H4A6 298 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 ABCC13Q9NSE7 274 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 CENPMQ9NSP4 180 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 GDAP2Q9NXN4 497 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 MBD2Q9UBB5 411 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 P2RX2Q9UBL9 471 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF490Q9ULM2 529 aaPredicted RBP4.89□□□□□ -1.63
NEDD4-203ENST00000502612 MROH7Q68CQ1 1323 aa4.89□□□□□ -1.63
NEDD4-203ENST00000502612 SCN4AP35499 1836 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 EP400Q96L91 3159 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 SIGLEC16A6NMB1 481 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF487B1APH4 448 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 H0YL77 283 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 M0QZ92 97 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 LGALS8O00214 317 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 SHOX2O60902 331 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 IGSF6O95976 241 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 GOT2P00505 430 aaKnown RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 AGTP01019 485 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 PTPN6P29350 595 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 TNFSF9P41273 254 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 PLTPP55058 493 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 SRYQ05066 204 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 CRMP1Q14194 572 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 LTB4RQ15722 352 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 PARP6Q2NL67 630 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 KRTAP27-1Q3LI81 207 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 KRT71Q3SY84 523 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 DNAJC21Q5F1R6 531 aaKnown RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 TFDP3Q5H9I0 405 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 SPOPLQ6IQ16 392 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 C4orf22Q6V702 233 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 CATSPER4Q7RTX7 472 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 UNC93AQ86WB7 457 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 RIBC1Q8N443 379 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 OR2L2Q8NH16 312 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 SELENOMQ8WWX9 145 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 ART4Q93070 314 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 NCLNQ969V3 563 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 HAUS1Q96CS2 278 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 WBP1Q96G27 269 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 HPDLQ96IR7 371 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 TMEM109Q9BVC6 243 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 DPH5Q9H2P9 285 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 TMBIM4Q9HC24 238 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 BARX2Q9UMQ3 279 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 UBQLN1Q9UMX0 589 aaKnown RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 MTF2Q9Y483 593 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 CSAG2Q9Y5P2 127 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 PTPRJQ12913 1337 aa4.88□□□□□ -1.63
NEDD4-203ENST00000502612 COL11A1P12107 1806 aaPredicted RBP4.88□□□□□ -1.63
NEDD4-203ENST00000502612 A0A0U1RQV5 110 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 RNF222A6NCQ9 220 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 LRIT2A6NDA9 550 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 ZSCAN5CA6NGD5 496 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 ERICH4A6NGS2 130 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SAP18O00422 153 aaKnown RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 E2F3O00716 465 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 NDUFAB1O14561 156 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 EIF3HO15372 352 aaKnown RBP eCLIP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 RGS16O15492 202 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SH3BGRLO75368 114 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 KIAA0754O94854 1291 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 TOXO94900 526 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 APBB3O95704 486 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 KRT14P02533 472 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 CA3P07451 260 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 CXCL8P10145 99 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 ARF4P18085 180 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 PSMA2P25787 234 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 PHBP35232 272 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 PCK1P35558 622 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 CRYBB1P53674 252 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 OSTNP61366 133 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 GNGT1P63211 74 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 INCA1Q0VD86 236 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 TFDP2Q14188 446 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 PDK2Q15119 407 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 ADPRMQ3LIE5 342 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 EIPR1Q53HC9 387 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 FAM43BQ6ZT52 329 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 PAQR9Q6ZVX9 377 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 GET4Q7L5D6 327 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 P4HA3Q7Z4N8 544 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 HIPK1Q86Z02 1210 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 CCDC36Q8IYA8 594 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SLC22A18ASQ8N1D0 253 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 FGFRL1Q8N441 504 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 BCORP1Q8N888 145 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SLC25A36Q96CQ1 311 aa4.87□□□□□ -1.63
NEDD4-203ENST00000502612 RBM18Q96H35 190 aaKnown RBP4.87□□□□□ -1.63
NEDD4-203ENST00000502612 SERPINB12Q96P63 405 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms