RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RAB36O95755 333 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 HMGN1P05114 100 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 LCKP06239 509 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 CELA2AP08217 269 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 STSP08842 583 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 CD63P08962 238 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 GP1BBP13224 206 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 MST1P26927 711 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ITPKBP27987 946 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 OTX2P32243 289 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC9A3P48764 834 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 P2RX1P51575 399 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 CDH11P55287 796 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 SUMO3P55854 103 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 FXYD6P3P58550 94 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 RPS18P62269 152 aaKnown RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 EMX1Q04741 257 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ST3GAL4Q11206 333 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 GTF2IRD2BQ6EKJ0 949 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 B3GNT6Q6ZMB0 384 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC46A3Q7Z3Q1 461 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 OAFQ86UD1 273 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 GTF2IRD2Q86UP8 949 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 GID4Q8IVV7 300 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 FAM26EQ8N5C1 309 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 AMER2Q8N7J2 671 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 PRSS33Q8NF86 280 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 OR5W2Q8NH69 310 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 B4GALNT2Q8NHY0 566 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 GGHQ92820 318 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 HGDQ93099 445 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 C12orf43Q96C57 262 aaKnown RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 DGCR14Q96DF8 476 aaKnown RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF582Q96NG8 517 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 IFT27Q9BW83 186 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 RTN4RQ9BZR6 473 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC19A3Q9BZV2 496 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 NDEL1Q9GZM8 345 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 METTL7AQ9H8H3 244 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 C12orf10Q9HB07 376 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ZBTB20Q9HC78 741 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 HHATLQ9HCP6 504 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 FAM86C1Q9NVL1 165 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 TOR4AQ9NXH8 423 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 TAS2R16Q9NYV7 291 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 TAS2R10Q9NYW0 307 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 FOXJ2Q9P0K8 574 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 PPP4R1LQ9P1A2 415 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ENPP5Q9UJA9 477 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ICAM5Q9UMF0 924 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 BAIAP2Q9UQB8 552 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 SIGLEC7Q9Y286 467 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 GPR52Q9Y2T5 361 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 RPL36Q9Y3U8 105 aaKnown RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 COMMD3-BMI1R4GMX3 469 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 MED13Q9UHV7 2174 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 IGKV1D-42A0A075B6H8 117 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 ANKUB1A6NFN9 424 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 TMEM200CA6NKL6 621 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 RIIAD1A6NNX1 92 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 C9orf172C9J069 976 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 H3BMQ9 156 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 BHLHE40O14503 412 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 SOCS6O14544 535 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF354AO60765 605 aaPredicted RBP7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC25A12O75746 678 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 OR2J2O76002 312 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 NDUFB2O95178 105 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 PTHP01270 115 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 IFNGP01579 166 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 RAB40ALP0C0E4 278 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 FBXO45P0C2W1 286 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF3P17036 446 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 NAGAP17050 411 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 TACR3P29371 465 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 GSTT1P30711 240 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 PEX19P40855 299 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC1A3P43003 542 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC15A1P46059 708 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 POLR2HP52434 150 aaKnown RBP7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 TCF15Q12870 199 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 DNASE1L3Q13609 305 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 QPRTQ15274 297 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 COL28A1Q2UY09 1125 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 GXYLT1Q4G148 440 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 UBE2UQ5VVX9 321 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 PLAG1Q6DJT9 500 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 NIPAL3Q6P499 406 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 POMZP3Q6PJE2 187 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 LINC00114Q6XXX2 140 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 CXXC5Q7LFL8 322 aaKnown RBP7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 NANOGNBQ7Z5D8 188 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 BCDIN3DQ7Z5W3 292 aaKnown RBP7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 LNX2Q8N448 690 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 ESX1Q8N693 406 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 C10orf53Q8N6V4 93 aa7.36□□□□□ -1.23
PDZRN3-212ENST00000498048 DEFB124Q8NES8 71 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms