RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, human

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXCL12-208	ENST00000496375	SYPL1	Q16563	259 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	TRMT5	Q32P41	509 aa	Known RBP	12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	PDSS1	Q5T2R2	415 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	PRSS57	Q6UWY2	283 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	BEND4	Q6ZU67	534 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	ANKS4B	Q8N8V4	417 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	ANKFN1	Q8N957	763 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	TOR1AIP2	Q8NFQ8	470 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	RP9	Q8TA86	221 aa	Known RBP	12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	OSTF1	Q92882	214 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	TMEM38A	Q9H6F2	299 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	C12orf49	Q9H741	205 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	BCL2L10	Q9HD36	194 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	FANCF	Q9NPI8	374 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	MKLN1	Q9UL63	735 aa		12.83	□□□□□ -0.36
CXCL12-208	ENST00000496375	ANK3	Q12955	4377 aa	Known RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	PRR14L	Q5THK1	2151 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	NPIPA5	A0A0B4J1W7	369 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	CENPVL1	A0A0U1RR11	272 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	SERINC4	A6NH21	518 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	AGAP5	A6NIR3	686 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	NPIPA7	E9PJI5	369 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375		H3BNH8	94 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ETV2	O00321	342 aa	Predicted RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	EIF4E2	O60573	245 aa	Known RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	LY6G6D	O95868	133 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	NPIPA8	P0DM63	369 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ARAF	P10398	606 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	SHC1	P29353	583 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	AGTR1	P30556	359 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	SFTPD	P35247	375 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	RNF144A	P50876	292 aa	Predicted RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	CRISP3	P54108	245 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	CARD18	P57730	90 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	HPCA	P84074	193 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ZNF117	Q03924	483 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	CHRNE	Q04844	493 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	FOXF1	Q12946	379 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	GNA13	Q14344	377 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	MAPK14	Q16539	360 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	PDZK1	Q5T2W1	519 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	FAM91A1	Q658Y4	838 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	GTF2IRD2B	Q6EKJ0	949 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ZNF704	Q6ZNC4	412 aa	Predicted RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	PLEKHM3	Q6ZWE6	761 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	NET1	Q7Z628	596 aa	Predicted RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	MTDH	Q86UE4	582 aa	Known RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	GTF2IRD2	Q86UP8	949 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	STK32C	Q86UX6	486 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	SNX32	Q86XE0	403 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	WFDC8	Q8IUA0	241 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	CMIP	Q8IY22	773 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	LILRA2	Q8N149	483 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	C10orf111	Q8N326	155 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	PHOSPHO1	Q8TCT1	267 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	SLC38A5	Q8WUX1	472 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ROBO4	Q8WZ75	1007 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ARSG	Q96EG1	525 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	KLHL15	Q96M94	604 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	BDH2	Q9BUT1	245 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ACTR6	Q9GZN1	396 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	MTHFD2L	Q9H903	347 aa	Predicted RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ARMCX1	Q9P291	453 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ICAM5	Q9UMF0	924 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ARL2BP	Q9Y2Y0	163 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	FN1	P02751	2386 aa	Known RBP	12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	ZAN	Q9Y493	2812 aa		12.82	□□□□□ -0.36
CXCL12-208	ENST00000496375	TRIM64	A6NGJ6	449 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	TRIM64B	A6NI03	449 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	EVPLL	A8MZ36	301 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	SMAD7	O15105	426 aa	Known RBP	12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	OIP5	O43482	229 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	NUDT14	O95848	222 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	FAM107A	O95990	144 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	PLAU	P00749	431 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	NUDT7	P0C024	238 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	NR2F1	P10589	423 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	PRDX6	P30041	224 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	EIF1	P41567	113 aa	Known RBP	12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	PTH2R	P49190	550 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	NR1H2	P55055	460 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	PLAUR	Q03405	335 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	SKP2	Q13309	424 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	NFYC	Q13952	458 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	CYLC2	Q14093	348 aa	Predicted RBP	12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	GPR68	Q15743	365 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	ADRM1	Q16186	407 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	ZNF239	Q16600	458 aa	Known RBP	12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	GPAT3	Q53EU6	434 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	REP15	Q6BDI9	236 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	CBLN3	Q6UW01	205 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	OLIG3	Q7RTU3	272 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	TREML1	Q86YW5	311 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	OR8J3	Q8NGG0	315 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	RNF128	Q8TEB7	428 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	PLPPR2	Q96GM1	343 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	TMEM19	Q96HH6	336 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	SRXN1	Q9BYN0	137 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	GSX2	Q9BZM3	304 aa		12.81	□□□□□ -0.36
CXCL12-208	ENST00000496375	FAM107B	Q9H098	131 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms