RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TRA2AQ13595 282 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP39-219ENST00000496047 ST3GAL2Q16842 350 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CT45A2Q5DJT8 189 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 ZC3H14Q6PJT7 736 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 C5orf46Q6UWT4 87 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 DGAT2L6Q6ZPD8 337 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 HIST3H2AQ7L7L0 130 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 JAZF1Q86VZ6 243 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PPP1R3BQ86XI6 285 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 GPALPP1Q8IXQ4 340 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 SLC25A45Q8N413 288 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 LNX2Q8N448 690 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 C10orf53Q8N6V4 93 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 POGLUT1Q8NBL1 392 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 FAM98AQ8NCA5 519 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 SIMC1Q8NDZ2 872 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PLPP5Q8NEB5 264 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 OR8D4Q8NGM9 314 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 OR52N1Q8NH53 320 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PFN4Q8NHR9 129 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 HAVCR2Q8TDQ0 301 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CNOT9Q92600 299 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 HIST1H2ACQ93077 130 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 NACC2Q96BF6 587 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 EFHD2Q96C19 240 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 GFM1Q96RP9 751 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 NUDT22Q9BRQ3 303 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 TMEM43Q9BTV4 400 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 JAM3Q9BX67 310 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 TGIF2Q9GZN2 237 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 C6orf62Q9GZU0 229 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 LAT2Q9GZY6 243 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 NUAK2Q9H093 628 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 KCNN2Q9H2S1 579 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 UBQLN3Q9H347 655 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 LRRN3Q9H3W5 708 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 GAREM1Q9H706 876 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 ZBTB20Q9HC78 741 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 TRIM36Q9NQ86 728 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 FBXO8Q9NRD0 319 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CMC2Q9NRP2 79 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 NDUFB11Q9NX14 153 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 MUTYHQ9UIF7 546 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 OSGIN1Q9UJX0 560 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 ZNF223Q9UK11 482 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PILRBQ9UKJ0 227 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 NXT1Q9UKK6 140 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 MKL2Q9ULH7 1088 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 NTNG1Q9Y2I2 539 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CAB39Q9Y376 341 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 PCDHGB6Q9Y5F9 930 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PCDHGA3Q9Y5H0 932 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 SPIN1Q9Y657 262 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 ZNF318Q5VUA4 2279 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 WDFY4Q6ZS81 3184 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 A0A087WUJ7 227 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CENPVL1A0A0U1RR11 272 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 DAPL1A0PJW8 107 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 DCDC2BA2VCK2 349 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 METTL15A6NJ78 407 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 C9J4A7 227 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 FAM47E-STBD1D6RA91 191 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 LOC110117498-PIK3R3F6TDL0 507 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NPIPB9F8W1W9 429 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TO15178 435 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CBFA2T3O75081 653 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 OR7A10O76100 309 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 PPP1R3DO95685 299 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NUDT14O95848 222 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 IGKV1D-16P01601 117 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 HLA-DPB1P04440 258 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CTSBP07858 339 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NGFRP08138 427 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CD63P08962 238 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CKMT1AP12532 417 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 GP1BBP13224 206 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 PRG2P13727 222 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 FOLR1P15328 257 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TBXA2RP21731 343 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CFL1P23528 166 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 CXCR1P25024 350 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ITPKBP27987 946 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 GABRA5P31644 462 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SOX18P35713 384 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SLC1A3P43003 542 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 RORCP51449 518 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NR0B1P51843 470 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 MLLT10P55197 1068 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 DEFA1P59665 94 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 DEFA3P59666 94 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ACTA2P62736 377 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ACTG2P63267 376 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 DCDP81605 110 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 ZNF45Q02386 682 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TNP2Q05952 138 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 DMWDQ09019 674 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CBFBQ13951 182 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 EBPQ15125 230 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms