RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 C3orf49Q96BT1 292 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 OR5B2Q96R09 309 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 UCN2Q96RP3 112 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 SRXN1Q9BYN0 137 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 SLC22A20A6NK97 555 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 GJE1A6NN92 205 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 SYT5O00445 386 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 C8BP07358 591 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 CXCR1P25024 350 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 SLC7A1P30825 629 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 CEACAM8P31997 349 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-212ENST00000495497 TIMP3P35625 211 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 AGFG1P52594 562 aaKnown RBP17.43■□□□□ 0.38
HDAC4-212ENST00000495497 SYT14P1Q58G82 188 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 PDSS1Q5T2R2 415 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 LIX1LQ8IVB5 337 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 GCNT2Q8N0V5 402 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 ZNF808Q8N4W9 903 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-212ENST00000495497 ROBO4Q8WZ75 1007 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 WNT2BQ93097 391 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 INTS12Q96CB8 462 aaKnown RBP17.43■□□□□ 0.38
HDAC4-212ENST00000495497 TPD52L3Q96J77 140 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 ARL5BQ96KC2 179 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 RPS6KB2Q9UBS0 482 aa17.43■□□□□ 0.38
HDAC4-212ENST00000495497 USP9XQ93008 2570 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-212ENST00000495497 A0A1B0GWA3 101 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 ZC3H12DA2A288 527 aaKnown RBP17.42■□□□□ 0.38
HDAC4-212ENST00000495497 AQP8O94778 261 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 IFNA14P01570 189 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 IL2RAP01589 272 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 GGT1P19440 569 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 NCALDP61601 193 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 FOXF2Q12947 444 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 OR1Q1Q15612 314 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 ATG4DQ86TL0 474 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-212ENST00000495497 RASSF5Q8WWW0 418 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 PROX1Q92786 737 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 MCHR1Q99705 422 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 ZNF559Q9BR84 538 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 UCK2Q9BZX2 261 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 TRIM2Q9C040 744 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 NDE1Q9NXR1 346 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 COQ3Q9NZJ6 369 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 TESQ9UGI8 421 aaKnown RBP17.42■□□□□ 0.38
HDAC4-212ENST00000495497 CD300AQ9UGN4 299 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 SH3GLB1Q9Y371 365 aa17.42■□□□□ 0.38
HDAC4-212ENST00000495497 SPIN1Q9Y657 262 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-212ENST00000495497 IGHV3-15A0A0B4J1V0 119 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 CPSF4LA6NMK7 179 aaKnown RBP17.41■□□□□ 0.38
HDAC4-212ENST00000495497 RCBTB2O95199 551 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 SYNGR4O95473 234 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 CLDN1O95832 211 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 SERPINA1P01009 418 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 KLK2P20151 261 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 HTR1EP28566 365 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 OR1E2P47887 323 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 CEACAM7Q14002 265 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 SAMD4BQ5PRF9 694 aaKnown RBP17.41■□□□□ 0.38
HDAC4-212ENST00000495497 GLYATQ6IB77 296 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 XKRXQ6PP77 449 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 RANBP3LQ86VV4 465 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-212ENST00000495497 TSPYL5Q86VY4 417 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-212ENST00000495497 CARM1Q86X55 608 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 LSMEM1Q8N8F7 131 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 SLC25A43Q8WUT9 341 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-212ENST00000495497 FAM162AQ96A26 154 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 TM9SF2Q99805 663 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 PRRG4Q9BZD6 226 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 TMEM27Q9HBJ8 222 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 BAG5Q9UL15 447 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 ZNF175Q9Y473 711 aa17.41■□□□□ 0.38
HDAC4-212ENST00000495497 DIDO1Q9BTC0 2240 aaKnown RBP17.41■□□□□ 0.38
HDAC4-212ENST00000495497 FAM90A27PA6NNH2 459 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 HSPB2A8KAH6 182 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 ZNF682O95780 498 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 TMIGD3P0DMS9 266 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-212ENST00000495497 HSD17B1P14061 328 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 CHRNB4P30926 498 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 DIO1P49895 249 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 SELENOWP63302 87 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 MYBPHQ13203 477 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 HSPB2Q16082 182 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 ZNF239Q16600 458 aaKnown RBP17.4■□□□□ 0.38
HDAC4-212ENST00000495497 ENTPD8Q5MY95 495 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 TMPPEQ6ZT21 453 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 VTCN1Q7Z7D3 282 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 RNF217Q8TC41 542 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 CA5BP1Q8WTZ4 195 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 ASB5Q8WWX0 329 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 DDIT4LQ96D03 193 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 PSMG3-AS1Q96PY0 264 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 PCDHAC1Q9H158 963 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 EVA1AQ9H8M9 152 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 TAS2R1Q9NYW7 299 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 MCTS1Q9ULC4 181 aaKnown RBP17.4■□□□□ 0.38
HDAC4-212ENST00000495497 CLEC4AQ9UMR7 237 aa17.4■□□□□ 0.38
HDAC4-212ENST00000495497 PHF3Q92576 2039 aaKnown RBP17.4■□□□□ 0.38
HDAC4-212ENST00000495497 COL12A1Q99715 3063 aa17.39■□□□□ 0.38
HDAC4-212ENST00000495497 A0A0B4J2E0 115 aa17.39■□□□□ 0.37
HDAC4-212ENST00000495497 A0A1B0GX12 115 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms