RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 FAM214BQ7L5A3 538 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 BTLAQ7Z6A9 289 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 SERPINA11Q86U17 422 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 ADGRG3Q86Y34 549 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 ARMC8Q8IUR7 673 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 POU5F2Q8N7G0 328 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 RP9Q8TA86 221 aaKnown RBP14.26□□□□□ -0.13
LIME1-209ENST00000494776 DDIT4LQ96D03 193 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 COQ10BQ9H8M1 238 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 KLHL28Q9NXS3 571 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 JKAMPQ9P055 326 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 OSGIN1Q9UJX0 560 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 PRDM4Q9UKN5 801 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 PROCRQ9UNN8 238 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 CENPEQ02224 2701 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 IGHV3-15A0A0B4J1V0 119 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 A8MXE2 369 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 FRS3O43559 492 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 PRKD3O94806 890 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 COX4I1P13073 169 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 PRG2P13727 222 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 DRD4P21917 467 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 ENPP1P22413 925 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 ACAA2P42765 397 aaKnown RBP14.25□□□□□ -0.13
LIME1-209ENST00000494776 KIR2DL3P43628 341 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 KCNJ5P48544 419 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 CLK1P49759 484 aaKnown RBP14.25□□□□□ -0.13
LIME1-209ENST00000494776 DIO1P49895 249 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 RNPS1Q15287 305 aaKnown RBP14.25□□□□□ -0.13
LIME1-209ENST00000494776 RABL3Q5HYI8 236 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 INTS11Q5TA45 600 aaKnown RBP14.25□□□□□ -0.13
LIME1-209ENST00000494776 TMPPEQ6ZT21 453 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 PTOV1Q86YD1 416 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 SLC30A8Q8IWU4 369 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 SLC43A2Q8N370 569 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 ACBD4Q8NC06 268 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 BHLHE22Q8NFJ8 381 aaPredicted RBP14.25□□□□□ -0.13
LIME1-209ENST00000494776 OR8J3Q8NGG0 315 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 SLC26A7Q8TE54 656 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 SLC35B4Q969S0 331 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 RCN3Q96D15 328 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 ZHX1-C8orf76Q96EF9 292 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 DNAJA3Q96EY1 480 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 ZNF559Q9BR84 538 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 OR11A1Q9GZK7 315 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 OPN3Q9H1Y3 402 aaPredicted RBP14.25□□□□□ -0.13
LIME1-209ENST00000494776 RPS6KB2Q9UBS0 482 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 HDGFL3Q9Y3E1 203 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 CHST2Q9Y4C5 530 aa14.25□□□□□ -0.13
LIME1-209ENST00000494776 CACNA1DQ01668 2161 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 TEX15Q9BXT5 2789 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 HCFC1P51610 2035 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 TMEM72A0PK05 275 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 AIM2O14862 343 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 SNX3O60493 162 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 SS18L1O75177 396 aaPredicted RBP14.24□□□□□ -0.13
LIME1-209ENST00000494776 PRF1P14222 555 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 SSTR2P30874 369 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 MAP2K6P52564 334 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 OR2B6P58173 313 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 NCALDP61601 193 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 HOXC5Q00444 222 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 TMEM201Q5SNT2 666 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 DHRS4L2Q6PKH6 230 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 NET1Q7Z628 596 aaPredicted RBP14.24□□□□□ -0.13
LIME1-209ENST00000494776 ZZZ3Q8IYH5 903 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 SMYD1Q8NB12 490 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 OR6K3Q8NGY3 331 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 RNF128Q8TEB7 428 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 ABHD3Q8WU67 409 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 ADAM19Q9H013 955 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 GALNT8Q9NY28 637 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 KCNN3Q9UGI6 736 aa14.24□□□□□ -0.13
LIME1-209ENST00000494776 CREBBPQ92793 2442 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 TUBAL3A6NHL2 446 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 M0QX08 132 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 FXYD1O00168 92 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 ZNF208O43345 1280 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 TPST1O60507 370 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 PMS2P2O95744 297 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 FESP07332 822 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 CD8BP10966 210 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 PCGF2P35227 344 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 TLE4Q04727 773 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 GUSBP1Q15486 140 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 VMACQ2NL98 169 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 PATL1Q86TB9 770 aaKnown RBP14.23□□□□□ -0.13
LIME1-209ENST00000494776 STK32CQ86UX6 486 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 ZNF610Q8N9Z0 462 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 C12orf49Q9H741 205 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 EFCAB1Q9HAE3 211 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 TMEM181Q9P2C4 612 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 KLHL9Q9P2J3 617 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 MED12LQ86YW9 2145 aa14.23□□□□□ -0.13
LIME1-209ENST00000494776 MFN2O95140 757 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 OPN1SWP03999 348 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 YES1P07947 543 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 POU2F1P14859 743 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 AGTR1P30556 359 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms