RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 APH1AQ96BI3 265 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 DDIT4LQ96D03 193 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 OR52E6Q96RD3 313 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
COL6A1-205ENST00000492851 CTPS2Q9NRF8 586 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 TMEM181Q9P2C4 612 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 RAB21Q9UL25 225 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
COL6A1-205ENST00000492851 PCNX3Q9H6A9 2034 aa11.02□□□□□ -0.64
COL6A1-205ENST00000492851 ACANP16112 2415 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 A0A1W2PP18 115 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 CIB4A0PJX0 185 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 AGAP5A6NIR3 686 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 OR5H1A6NKK0 313 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 C9JVG2 144 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 HMGN4O00479 90 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 FAAHO00519 579 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 MRPL33O75394 65 aaKnown RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 LYZL6O75951 148 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 IL6P05231 212 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 DBIP07108 87 aaKnown RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 DANCRP0C864 163 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 IL7RP16871 459 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 COX5AP20674 150 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 SLC1A3P43003 542 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 IDH2P48735 452 aaKnown RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 POLR2HP52434 150 aaKnown RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 SLC16A1P53985 500 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 SLC18A1P54219 525 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 CASP9P55211 416 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 SLC35A1P78382 337 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 BSPH1Q075Z2 132 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 BST1Q10588 318 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 TSC22D1Q15714 1073 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 STK11Q15831 433 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ATG16L1Q676U5 607 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ABLIM2Q6H8Q1 611 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 RNF130Q86XS8 419 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ADGRG3Q86Y34 549 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 PEX5LQ8IYB4 626 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 LILRB1Q8NHL6 650 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF775Q96BV0 537 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF524Q96C55 264 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ZG16BQ96DA0 208 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF300Q96RE9 604 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ALG2Q9H553 416 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 BARX1Q9HBU1 254 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 AIG1Q9NVV5 245 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 ASB6Q9NWX5 421 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 THUMPD1Q9NXG2 353 aaKnown RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 CISD1Q9NZ45 108 aaKnown RBP11.02□□□□□ -0.65
COL6A1-205ENST00000492851 CALML5Q9NZT1 146 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 PRSS50Q9UI38 385 aa11.02□□□□□ -0.65
COL6A1-205ENST00000492851 FAM234BA2RU67 622 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 DPRXA6NFQ7 191 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 CFAP73A6NFT4 308 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 NR2F1P10589 423 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 IDO1P14902 403 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 IGHV1-2P23083 117 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 PAX7P23759 505 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 PTAFRP25105 342 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 OR2B6P58173 313 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 UFM1P61960 85 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 H3F3AP84243 136 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 TGFBR3Q03167 851 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 MPP2Q14168 576 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 CLEC12BQ2HXU8 276 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF433Q8N7K0 673 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-205ENST00000492851 WDR60Q8WVS4 1066 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 TRIM2Q9C040 744 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 PIF1Q9H611 641 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 ARMC7Q9H6L4 198 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 CACYBPQ9HB71 228 aaKnown RBP11.01□□□□□ -0.65
COL6A1-205ENST00000492851 TAS2R16Q9NYV7 291 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF232Q9UNY5 417 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 GPR45Q9Y5Y3 372 aa11.01□□□□□ -0.65
COL6A1-205ENST00000492851 V9GYY5 206 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-205ENST00000492851 TMED7-TICAM2A0A0A6YYA0 188 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 GOLGA8QA0A0J9YX86 632 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 CENPVL1A0A0U1RR11 272 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 GOLGA8OA6NCC3 632 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 TMEM247A6NEH6 219 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 CCT8L1PA6NM43 557 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF716A6NP11 495 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 GOLGA8NF8WBI6 632 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 RFXANKO14593 260 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
COL6A1-205ENST00000492851 SLC22A3O75751 556 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 BMP4P12644 408 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 COPZ1P61923 177 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 SYPL1Q16563 259 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 NRF1Q16656 503 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 MUS81Q96NY9 551 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms