RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BSPH1Q075Z2 132 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 KRTAP1-1Q07627 177 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 MERTKQ12866 999 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 TSC22D1Q15714 1073 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ETFDHQ16134 617 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 PGGHGQ32M88 737 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 FAM174BQ3ZCQ3 159 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF672Q499Z4 452 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 TIMM23BQ5SRD1 257 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 FBXW9Q5XUX1 488 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 PPP4R4Q6NUP7 873 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 TNFAIP8L2Q6P589 184 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 BHLHA15Q7RTS1 189 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 SPATA19Q7Z5L4 167 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 GALNT5Q7Z7M9 940 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 CROCCP2Q86T23 111 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ATG4DQ86TL0 474 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 DTX2Q86UW9 622 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF433Q8N7K0 673 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF614Q8N883 585 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ATP6V1C2Q8NEY4 427 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 PERPQ96FX8 193 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 MUS81Q96NY9 551 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 OR5B2Q96R09 309 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC35A5Q9BS91 424 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 AMBRA1Q9C0C7 1298 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ESRP2Q9H6T0 727 aaKnown RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 MTHFD2LQ9H903 347 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 NGBQ9NPG2 151 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 THAP1Q9NVV9 213 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 MALT1Q9UDY8 824 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 PRSS50Q9UI38 385 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 RNF115Q9Y4L5 304 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 DSPPQ9NZW4 1301 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 RTTNQ86VV8 2226 aa7.4□□□□□ -1.23
SMARCB1-207ENST00000491967 COL6A5A8TX70 2615 aa7.4□□□□□ -1.23
SMARCB1-207ENST00000491967 CHD3Q12873 2000 aaKnown RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 DNHD1Q96M86 4753 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CCDC154A6NI56 674 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 OR5H1A6NKK0 313 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CLDN24A6NM45 220 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 SHISA9B4DS77 424 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 GPR171O14626 319 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CPSF4O95639 269 aaKnown RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 FESP07332 822 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CD3EP07766 207 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CHRM4P08173 479 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 IL32P24001 234 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 S100A3P33764 101 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CDKN2CP42773 168 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 HTR3AP46098 478 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 RPS4XP62701 263 aaKnown RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CEP85LQ5SZL2 805 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 LRRC74BQ6ZQY2 392 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 Q71RC1 249 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 RNF130Q86XS8 419 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 TMCO5AQ8N6Q1 288 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 ANKFN1Q8N957 763 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 GLB1L3Q8NCI6 653 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 RFWD2Q8NHY2 731 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 SMAP2Q8WU79 429 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CNOT9Q92600 299 aaKnown RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 FBXW5Q969U6 566 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 PPP1R36Q96LQ0 422 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 OR52E6Q96RD3 313 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 INPP5KQ9BT40 448 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 PIF1Q9H611 641 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 CTPS2Q9NRF8 586 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 SDR39U1Q9NRG7 319 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC6A13Q9NSD5 602 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 NPAP1Q9NZP6 1156 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 MARCOQ9UEW3 520 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 OSGIN1Q9UJX0 560 aa7.39□□□□□ -1.23
SMARCB1-207ENST00000491967 UQCRHLA0A096LP55 91 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 CDHR4A6H8M9 788 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TRPC5OSA6NMA1 111 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 C9JVG2 144 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 SLCO1B7G3V0H7 640 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 AP3D1O14617 1153 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 EIF1BO60739 113 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 RAMP1O60894 148 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 FZD7O75084 574 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 CYP7B1O75881 506 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 LYZL6O75951 148 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 IL6P05231 212 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TFPTP0C1Z6 253 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 GGT1P19440 569 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 ACAA2P42765 397 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC1A3P43003 542 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 IDH2P48735 452 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 MRPL19P49406 292 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 CCR4P51679 360 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 ATP5J2P56134 94 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 EPS8Q12929 822 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TNK1Q13470 666 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC17A1Q14916 467 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 PPA1Q15181 289 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 SYPL1Q16563 259 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms