RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CMIPQ8IY22 773 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 OR9I1Q8NGQ6 314 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 WDR60Q8WVS4 1066 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 USH1CQ9Y6N9 552 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 ZFHX3Q15911 3703 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 FLNAP21333 2647 aaKnown RBP15.95■□□□□ 0.14
HMGN1-219ENST00000491183 IGKV3D-15A0A087WSY6 115 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 ZNF716A6NP11 495 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 UBDO15205 165 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 PMS2P2O95744 297 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 ETFAP13804 333 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 IL32P24001 234 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 NTF4P34130 210 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 POLR2JP52435 117 aaKnown RBP15.94■□□□□ 0.14
HMGN1-219ENST00000491183 PDK3Q15120 406 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 MRPL2Q5T653 305 aaKnown RBP15.94■□□□□ 0.14
HMGN1-219ENST00000491183 ABLIM2Q6H8Q1 611 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 EPGNQ6UW88 154 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 P3H2Q8IVL5 708 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 PMM1Q92871 262 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 KISS1RQ969F8 398 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-219ENST00000491183 VPS33AQ96AX1 596 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 AURKBQ96GD4 344 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-219ENST00000491183 SMR3AQ99954 134 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 OSGIN1Q9UJX0 560 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 HDGFL3Q9Y3E1 203 aa15.94■□□□□ 0.14
HMGN1-219ENST00000491183 SPIN1Q9Y657 262 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-219ENST00000491183 TMED7-TICAM2A0A0A6YYA0 188 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 ARHGEF9O43307 516 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 RAMP1O60894 148 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 DBIP07108 87 aaKnown RBP15.93■□□□□ 0.14
HMGN1-219ENST00000491183 TFPTP0C1Z6 253 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 IL7RP16871 459 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 FKBP2P26885 142 aaKnown RBP15.93■□□□□ 0.14
HMGN1-219ENST00000491183 MAGEA8P43361 318 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 CLK1P49759 484 aaKnown RBP15.93■□□□□ 0.14
HMGN1-219ENST00000491183 Q5PR19 223 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 NCMAPQ5T1S8 102 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 SEZ6L2Q6UXD5 910 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 BHLHA15Q7RTS1 189 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-219ENST00000491183 GALNT5Q7Z7M9 940 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 ATG4DQ86TL0 474 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-219ENST00000491183 VRK2Q86Y07 508 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 LILRB1Q8NHL6 650 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-219ENST00000491183 HSD17B8Q92506 261 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 ITCHQ96J02 903 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 C18orf12Q96KH6 178 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 TPT1P8Q9HAU6 139 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 RLIMQ9NVW2 624 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 TMED7Q9Y3B3 224 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 DSPPQ9NZW4 1301 aa15.93■□□□□ 0.14
HMGN1-219ENST00000491183 TMEM72A0PK05 275 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 FAAHO00519 579 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 HS3ST1O14792 307 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 LYZL6O75951 148 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 ANP32DO95626 131 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 IMPDH2P12268 514 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 IGHV1-2P23083 117 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 TACR3P29371 465 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 CRATP43155 626 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 HTR3AP46098 478 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 POLR2HP52434 150 aaKnown RBP15.92■□□□□ 0.14
HMGN1-219ENST00000491183 OR2B6P58173 313 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 H3F3AP84243 136 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 EPS8Q12929 822 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 MSANTD1Q6ZTZ1 278 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 CCDC103Q8IW40 242 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 PEX5LQ8IYB4 626 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 MIER2Q8N344 545 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 ZNF611Q8N823 705 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 OR52P1PQ8NH57 321 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 SLC38A5Q8WUX1 472 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 AKAP1Q92667 903 aaKnown RBP eCLIP15.92■□□□□ 0.14
HMGN1-219ENST00000491183 PERPQ96FX8 193 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 C7orf26Q96N11 449 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 ADAM19Q9H013 955 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 RMND5AQ9H871 391 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 SLCO1B3Q9NPD5 702 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 TMEM181Q9P2C4 612 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 P2RX2Q9UBL9 471 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 TRAPPC4Q9Y296 219 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 NF1P21359 2839 aa15.92■□□□□ 0.14
HMGN1-219ENST00000491183 ZC3H12DA2A288 527 aaKnown RBP15.91■□□□□ 0.14
HMGN1-219ENST00000491183 FAM234BA2RU67 622 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 CDHR4A6H8M9 788 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 CFAP73A6NFT4 308 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 ZNF208O43345 1280 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 DNPH1O43598 174 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 BCHEP06276 602 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 GKN3PP0CG01 181 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 ACAA2P42765 397 aaKnown RBP15.91■□□□□ 0.14
HMGN1-219ENST00000491183 SLC1A3P43003 542 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 DSTNP60981 165 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 GNA13Q14344 377 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 SLC2A7Q6PXP3 512 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 PRSS57Q6UWY2 283 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 ZNF836Q6ZNA1 936 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 ZNF100Q8IYN0 542 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 GTF2H4Q92759 462 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 ZHX1-C8orf76Q96EF9 292 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms