RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ZNF382Q96SR6 550 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MBOAT4Q96T53 435 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 CGREF1Q99674 301 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LPAR4Q99677 370 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 NEURL2Q9BR09 285 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 NTMT1Q9BV86 223 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 UGT2B28Q9BY64 529 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 WDR12Q9GZL7 423 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 NAA50Q9GZZ1 169 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LHPPQ9H008 270 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RHBGQ9H310 441 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 RAD21L1Q9H4I0 556 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GORASP2Q9H8Y8 452 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 AKIRIN1Q9H9L7 192 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 NTN4Q9HB63 628 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LYRM4Q9HD34 91 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 SEMA4BQ9NPR2 832 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LYARQ9NX58 379 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 LUZP4Q9P127 313 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 HCN3Q9P1Z3 774 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 COPS7AQ9UBW8 275 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 GIMAP2Q9UG22 337 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 PHF11Q9UIL8 331 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 FBXL4Q9UKA2 621 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 USP22Q9UPT9 525 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MMACHCQ9Y4U1 282 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 CLCA3PQ9Y6N3 262 aa4.33□□□□□ -1.72
CSTF1-205ENST00000490539 MDC1Q14676 2089 aaKnown RBP4.33□□□□□ -1.72
CSTF1-205ENST00000490539 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF860A6NHJ4 632 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 TTC36A6NLP5 189 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 VSTM2BA6NLU5 285 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 MAGEB17A8MXT2 336 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CLDN25C9JDP6 229 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 C9JVG2 144 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 G3V2T6 193 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 H0YIZ8 118 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 J3QRK9 145 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 M0QX08 132 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 E2F3O00716 465 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 P2RX6O15547 441 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CHST10O43529 356 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 MRPS14O60783 128 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 GMNNO75496 209 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CDC123O75794 336 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 RSL1D1O76021 490 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SERPINA7P05543 415 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CAPN1P07384 714 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ALOX5P09917 674 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CCDC159P0C7I6 412 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 HSD3B1P14060 373 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 TNNI3P19429 210 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 HIST1H1TP22492 207 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CPN2P22792 545 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 EEF1B2P24534 225 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 RYKP34925 604 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 YAP1P46937 504 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 RPS3AP61247 264 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 PPP2R2BQ00005 443 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 HOXA4Q00056 320 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 MAT1AQ00266 395 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SRSF4Q08170 494 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 FOXD4Q12950 439 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 IL18R1Q13478 541 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 OXA1LQ15070 435 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 TRIM16LQ309B1 348 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 BTBD16Q32M84 506 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 C18orf21Q32NC0 220 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ATP6AP1LQ52LC2 224 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SGO1Q5FBB7 561 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 FBXO48Q5FWF7 155 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 C6orf136Q5SQH8 315 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ATP1A1-AS1Q5TC04 95 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF691Q5VV52 312 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 FAM219BQ5XKK7 198 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 OR4C11Q6IEV9 310 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 LCN10Q6JVE6 187 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SLC16A12Q6ZSM3 486 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 NCCRP1Q6ZVX7 275 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CPEB2Q7Z5Q1 589 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 IGFN1Q86VF2 1251 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ZNF595Q8IYB9 648 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 LAS2Q8IYD9 372 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SAMD14Q8IZD0 417 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CLEC4FQ8N1N0 589 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SIRT6Q8N6T7 355 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 AMER3Q8N944 861 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 L3MBTL4Q8NA19 623 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 CHDHQ8NE62 594 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 PLPP5Q8NEB5 264 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 SEMA6DQ8NFY4 1073 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 OR11G2Q8NGC1 345 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 OR2T11Q8NH01 316 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 OR5K1Q8NHB7 308 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 HUS1BQ8NHY5 278 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 METTL6Q8TCB7 284 aa4.32□□□□□ -1.72
CSTF1-205ENST00000490539 UTP15Q8TED0 518 aaKnown RBP4.32□□□□□ -1.72
CSTF1-205ENST00000490539 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms