RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 ROS1P08922 2347 aa9.19□□□□□ -0.94
RBM39-236ENST00000490484 TMED7-TICAM2A0A0A6YYA0 188 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 CFAP73A6NFT4 308 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ZNF724A8MTY0 619 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ZNF814B7Z6K7 855 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 LYZL6O75951 148 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 PMS2P2O95744 297 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 PLAUP00749 431 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 DBIP07108 87 aaKnown RBP9.18□□□□□ -0.94
RBM39-236ENST00000490484 UQCRBP14927 111 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 IL7RP16871 459 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 OR3A2P47893 321 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 POLR2JP52435 117 aaKnown RBP9.18□□□□□ -0.94
RBM39-236ENST00000490484 MVDP53602 400 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 DSTNP60981 165 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ITGADQ13349 1161 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 CAPRIN1Q14444 709 aaKnown RBP9.18□□□□□ -0.94
RBM39-236ENST00000490484 TAB1Q15750 504 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 MAPK11Q15759 364 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 STK11Q15831 433 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 FREM1Q5H8C1 2179 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 RPS26P11Q5JNZ5 115 aaPredicted RBP9.18□□□□□ -0.94
RBM39-236ENST00000490484 AGBL2Q5U5Z8 902 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 SLC2A7Q6PXP3 512 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ZNF836Q6ZNA1 936 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 Q6ZT83 130 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 GALNT5Q7Z7M9 940 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ATG4DQ86TL0 474 aaPredicted RBP9.18□□□□□ -0.94
RBM39-236ENST00000490484 PEX5LQ8IYB4 626 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ZNF100Q8IYN0 542 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 LRRC8CQ8TDW0 803 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 ZHX1-C8orf76Q96EF9 292 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 C7orf26Q96N11 449 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 PIP5K1AQ99755 562 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 HDHD5Q9BXW7 423 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 GSX1Q9H4S2 264 aaPredicted RBP9.18□□□□□ -0.94
RBM39-236ENST00000490484 TPT1P8Q9HAU6 139 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 SLCO1B3Q9NPD5 702 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 RLIMQ9NVW2 624 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 DSPPQ9NZW4 1301 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 EMC3Q9P0I2 261 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 TMED7Q9Y3B3 224 aa9.18□□□□□ -0.94
RBM39-236ENST00000490484 TMEM72A0PK05 275 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 FAM234BA2RU67 622 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 CDHR4A6H8M9 788 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 ZNF716A6NP11 495 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 HS3ST1O14792 307 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 POLR3GO15318 223 aaPredicted RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 CLOCKO15516 846 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 ARHGEF9O43307 516 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 RAMP1O60894 148 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 IGHV3-9P01782 118 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 IGHV1-2P23083 117 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 TACR3P29371 465 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 HTR3AP46098 478 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 POLR2HP52434 150 aaKnown RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 CRISP3P54108 245 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 OR2B6P58173 313 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 STX1BP61266 288 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 EPS8Q12929 822 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 P2RY6Q15077 328 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 LIN52Q52LA3 116 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 SHEQ5VZ18 495 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 AP1ARQ63HQ0 302 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 EPGNQ6UW88 154 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 MSANTD1Q6ZTZ1 278 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 BHLHA15Q7RTS1 189 aaPredicted RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 MTDHQ86UE4 582 aaKnown RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 VRK2Q86Y07 508 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 ADGRG3Q86Y34 549 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 LRRC75A-AS1Q8N1F1 130 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 CADM2Q8N3J6 435 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 OR52P1PQ8NH57 321 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 PIGXQ8TBF5 258 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 SLC38A5Q8WUX1 472 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 AKAP1Q92667 903 aaKnown RBP eCLIP9.17□□□□□ -0.94
RBM39-236ENST00000490484 APH1AQ96BI3 265 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 ATP6V1G3Q96LB4 118 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 SMR3AQ99954 134 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 EBF4Q9BQW3 602 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 TMEM204Q9BSN7 226 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 CACYBPQ9HB71 228 aaKnown RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 TCF7L2Q9NQB0 619 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 CALML5Q9NZT1 146 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 OSGIN1Q9UJX0 560 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 ZNF443Q9Y2A4 671 aaPredicted RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 NOSIPQ9Y314 301 aaKnown RBP9.17□□□□□ -0.94
RBM39-236ENST00000490484 HDGFL3Q9Y3E1 203 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 RNF115Q9Y4L5 304 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 PRR14LQ5THK1 2151 aa9.17□□□□□ -0.94
RBM39-236ENST00000490484 NIPBLQ6KC79 2804 aaeCLIP9.17□□□□□ -0.94
RBM39-236ENST00000490484 ARID1AO14497 2285 aa9.16□□□□□ -0.94
RBM39-236ENST00000490484 DSCAMO60469 2012 aa9.16□□□□□ -0.94
RBM39-236ENST00000490484 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
RBM39-236ENST00000490484 ZC3H12DA2A288 527 aaKnown RBP9.16□□□□□ -0.94
RBM39-236ENST00000490484 NR5A2O00482 541 aa9.16□□□□□ -0.94
RBM39-236ENST00000490484 DNPH1O43598 174 aa9.16□□□□□ -0.94
RBM39-236ENST00000490484 RAD51DO75771 328 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms