RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HDGFL3Q9Y3E1 203 aa17.57■□□□□ 0.4
SMC4-222ENST00000490207 TMED7-TICAM2A0A0A6YYA0 188 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 CLIC1O00299 241 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 PMS2P2O95744 297 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 CCNA2P20248 432 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 PSMB1P20618 241 aaKnown RBP17.56■□□□□ 0.4
SMC4-222ENST00000490207 POLR2HP52434 150 aaKnown RBP17.56■□□□□ 0.4
SMC4-222ENST00000490207 IRX1P78414 480 aaPredicted RBP17.56■□□□□ 0.4
SMC4-222ENST00000490207 LRIF1Q5T3J3 769 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 C22orf34Q6ZV56 151 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 CXorf67Q86X51 503 aaPredicted RBP17.56■□□□□ 0.4
SMC4-222ENST00000490207 ADGRG3Q86Y34 549 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 STON2Q8WXE9 905 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 DNAJA3Q96EY1 480 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 THOC1Q96FV9 657 aaKnown RBP17.56■□□□□ 0.4
SMC4-222ENST00000490207 ARL5BQ96KC2 179 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 ZNF300Q96RE9 604 aaPredicted RBP17.56■□□□□ 0.4
SMC4-222ENST00000490207 OR11A1Q9GZK7 315 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 ACTR6Q9GZN1 396 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 OR10A4Q9H209 315 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 CXXC4Q9H2H0 198 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 OSGIN1Q9UJX0 560 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 GPR52Q9Y2T5 361 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 TMED7Q9Y3B3 224 aa17.56■□□□□ 0.4
SMC4-222ENST00000490207 FREM1Q5H8C1 2179 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 A0A0G2JPF8 293 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 CDHR4A6H8M9 788 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 HNRNPCL2B2RXH8 293 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 HNRNPCL3B7ZW38 293 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 HNRNPCL1O60812 293 aaKnown RBP17.55■□□□□ 0.4
SMC4-222ENST00000490207 GCM2O75603 506 aaPredicted RBP17.55■□□□□ 0.4
SMC4-222ENST00000490207 THBDP07204 575 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 THBS1P07996 1170 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 NUDT7P0C024 238 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 HNRNPCL4P0DMR1 293 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 FKBP2P26885 142 aaKnown RBP17.55■□□□□ 0.4
SMC4-222ENST00000490207 TACR3P29371 465 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 SLC1A3P43003 542 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 CLK1P49759 484 aaKnown RBP17.55■□□□□ 0.4
SMC4-222ENST00000490207 LARS2Q15031 903 aaKnown RBP17.55■□□□□ 0.4
SMC4-222ENST00000490207 AGKQ53H12 422 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 RNF220Q5VTB9 566 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 GABRG1Q8N1C3 465 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 MBD6Q96DN6 1003 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 ALPK1Q96QP1 1244 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 A4GALTQ9NPC4 353 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 RLIMQ9NVW2 624 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 TMEM45AQ9NWC5 275 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 SLC25A37Q9NYZ2 338 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 HIVEP1P15822 2718 aa17.55■□□□□ 0.4
SMC4-222ENST00000490207 PRRC2AP48634 2157 aaKnown RBP17.55■□□□□ 0.4
SMC4-222ENST00000490207 TMEM72A0PK05 275 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 ZNF724A8MTY0 619 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 DNPH1O43598 174 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 GKN3PP0CG01 181 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 BMP2P12643 396 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 OR3A2P47893 321 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 PAGE3Q5JUK9 113 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 MTDHQ86UE4 582 aaKnown RBP17.54■□□□□ 0.4
SMC4-222ENST00000490207 LSRQ86X29 649 aaPredicted RBP17.54■□□□□ 0.4
SMC4-222ENST00000490207 MSRB3Q8IXL7 192 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 BBS10Q8TAM1 723 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 PIGXQ8TBF5 258 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 DDIT4LQ96D03 193 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 EMC3Q9P0I2 261 aa17.54■□□□□ 0.4
SMC4-222ENST00000490207 TEP1Q99973 2627 aaKnown RBP17.54■□□□□ 0.4
SMC4-222ENST00000490207 RAI1Q7Z5J4 1906 aaPredicted RBP17.54■□□□□ 0.4
SMC4-222ENST00000490207 C5orf58C9J3I9 102 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 ZNF208O43345 1280 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 EDF1O60869 148 aaKnown RBP17.53■□□□□ 0.4
SMC4-222ENST00000490207 PPIBP23284 216 aaKnown RBP17.53■□□□□ 0.4
SMC4-222ENST00000490207 IL32P24001 234 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 LOXP28300 417 aaPredicted RBP17.53■□□□□ 0.4
SMC4-222ENST00000490207 OR2B6P58173 313 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 ZSWIM7Q19AV6 140 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 DEFB113Q30KQ7 82 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 BEX5Q5H9J7 111 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 GCNT6Q5T4J0 391 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 PRAMEF8Q5VWM4 474 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 PRAMEF7Q5VXH5 474 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 GALNT5Q7Z7M9 940 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 WFDC8Q8IUA0 241 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 STEAP2Q8NFT2 490 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 MAL2Q969L2 176 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 HS3ST6Q96QI5 342 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 SPATA9Q9BWV2 254 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 RABEP2Q9H5N1 569 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 ARMC7Q9H6L4 198 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 BCL2L10Q9HD36 194 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 NPHS2Q9NP85 383 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 SLC52A3Q9NQ40 469 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 VAPAQ9P0L0 249 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 SLAMF8Q9P0V8 285 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 TMEM181Q9P2C4 612 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 PRSS50Q9UI38 385 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 DCTN4Q9UJW0 460 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 ZNF232Q9UNY5 417 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 IFT52Q9Y366 437 aa17.53■□□□□ 0.4
SMC4-222ENST00000490207 MED13LQ71F56 2210 aa17.52■□□□□ 0.4
SMC4-222ENST00000490207 ADAP00813 363 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms