RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 A0A087WZY1 265 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TCP11X1B4DZS4 312 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TMX2-CTNND1H3BSU7 103 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 ZSCAN12O43309 604 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 RIPK2O43353 540 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 OR1F1O43749 312 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TPST2O60704 377 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 ZNF324O75467 553 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TM7SF2O76062 418 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 UFL1O94874 794 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 WISP3O95389 354 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-206ENST00000489868 CHTF8P0CG12 524 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 ZNF44P15621 663 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TNNI3P19429 210 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 ATP6V1B2P21281 511 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 PTGDSP41222 190 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 ARL6IP1Q15041 203 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 GGTA1PQ4G0N0 100 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TMEM41BQ5BJD5 291 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 MFSD6LQ8IWD5 586 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 BRSK1Q8TDC3 778 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 FAM3CQ92520 227 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 PIGCQ92535 297 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 RAPGEF5Q92565 580 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 TIMD4Q96H15 378 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 NRIP2Q9BQI9 281 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 PLA2G2FQ9BZM2 168 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 CYTL1Q9NRR1 136 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 SMPD3Q9NY59 655 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-206ENST00000489868 ACTR3BQ9P1U1 418 aa3.02□□□□□ -1.93
CCDC39-206ENST00000489868 HOOK1Q9UJC3 728 aaKnown RBP3.02□□□□□ -1.93
CCDC39-206ENST00000489868 CLSPNQ9HAW4 1339 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 NKX2-6A6NCS4 301 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 A6NIZ1 184 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 E7ESA3 106 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 E9PBE3 544 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 RS1O15537 224 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 POLR2EP19388 210 aaKnown RBP3.01□□□□□ -1.93
CCDC39-206ENST00000489868 FGF9P31371 208 aaPredicted RBP3.01□□□□□ -1.93
CCDC39-206ENST00000489868 HNRNPA3P51991 378 aaKnown RBP3.01□□□□□ -1.93
CCDC39-206ENST00000489868 CRISP3P54108 245 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 RAP1BP61224 184 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 SELENOTP62341 195 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 PJVKQ0ZLH3 352 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 SCGB2A2Q13296 93 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 PTGES3Q15185 160 aaKnown RBP3.01□□□□□ -1.93
CCDC39-206ENST00000489868 NRF1Q16656 503 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 TRIM16LQ309B1 348 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 CTRB2Q6GPI1 263 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 FAM71F2Q6NXP2 309 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 RDH10Q8IZV5 341 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 OR51S1Q8NGJ8 323 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 OR51G1Q8NGK1 321 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 TCTEX1D2Q8WW35 142 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 ST8SIA1Q92185 356 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 OSTF1Q92882 214 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 SLC35A5Q9BS91 424 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 NXF5Q9H1B4 397 aaKnown RBP3.01□□□□□ -1.93
CCDC39-206ENST00000489868 VCXQ9H320 206 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 NTN4Q9HB63 628 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 U3KQV3 271 aa3.01□□□□□ -1.93
CCDC39-206ENST00000489868 A0A096LNJ9 63 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 A0A1B0GUS0 222 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 GSAPA4D1B5 854 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 DLGAP1O14490 977 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 ICOSLGO75144 302 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 TRIM16O95361 564 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 DIRAS3O95661 229 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 AK1P00568 194 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 PCCBP05166 539 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 HTR2AP28223 471 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 SH3BGRP55822 239 aaPredicted RBP3□□□□□ -1.93
CCDC39-206ENST00000489868 TAS2R19P59542 299 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 KRTAP10-10P60014 251 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 CNTN2Q02246 1040 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 KCTD19Q17RG1 926 aaPredicted RBP3□□□□□ -1.93
CCDC39-206ENST00000489868 TP53I3Q53FA7 332 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 C11orf71Q6IPW1 123 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 ZNF540Q8NDQ6 660 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 OR10A7Q8NGE5 316 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 OR4D9Q8NGE8 314 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 ARPC1AQ92747 370 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 SLC17A9Q9BYT1 436 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 C20orf85Q9H1P6 137 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 DPH5Q9H2P9 285 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 SMYD3Q9H7B4 428 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 RBAKQ9NYW8 714 aaPredicted RBP3□□□□□ -1.93
CCDC39-206ENST00000489868 AIPL1Q9NZN9 384 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 ODF2LQ9ULJ1 636 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 RASD1Q9Y272 281 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 V9GY05 133 aa3□□□□□ -1.93
CCDC39-206ENST00000489868 SF3B1O75533 1304 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 IGHV1OR21-1A0A087WYE8 117 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 DCTN6O00399 190 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 PES1O00541 588 aaKnown RBP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 P04436 131 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 H2BFMP0C1H6 154 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms