RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 MSR1P21757 451 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 HMGB2P26583 209 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC1A2P43004 574 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 DUSP3P51452 185 aaPredicted RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ARHGDIAP52565 204 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RGS8P57771 180 aaPredicted RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 YWHAEP62258 255 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RPS18P62269 152 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 LGALS3BPQ08380 585 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ART3Q13508 389 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 CALCRLQ16602 461 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 DUSP5Q16690 384 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 MRGPRG-AS1Q2M3A8 158 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 TMEM35AQ53FP2 167 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC35D3Q5M8T2 416 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 C1orf220Q5T0J3 134 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 PRR5LQ6MZQ0 368 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RHBDD2Q6NTF9 364 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ACSM5Q6NUN0 579 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 NEPROQ6NW34 567 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM71F2Q6NXP2 309 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 HACD2Q6Y1H2 254 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 TUBA1AQ71U36 451 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 NKAIN4Q8IVV8 208 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RNF113BQ8IZP6 322 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 DNAJC22Q8N4W6 341 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF383Q8NA42 475 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 LRRC75AQ8NAA5 344 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 PROKR2Q8NFJ6 384 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 OR2T12Q8NG77 320 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 OR10H4Q8NGA5 316 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 OR51L1Q8NGJ5 315 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 CCDC12Q8WUD4 166 aaPredicted RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 SECTM1Q8WVN6 248 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ZBED3Q96IU2 234 aaPredicted RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 C7orf34Q96L11 122 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 TGS1Q96RS0 853 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RBM4BQ9BQ04 359 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 APOOQ9BUR5 198 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RBM4Q9BWF3 364 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 MIS12Q9H081 205 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 FNDC4Q9H6D8 234 aaPredicted RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 MRPS30Q9NP92 439 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 PNO1Q9NRX1 252 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 DCAF13Q9NV06 445 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 MBD2Q9UBB5 411 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 PHF11Q9UIL8 331 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 FBXL4Q9UKA2 621 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 STAP1Q9ULZ2 295 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 RPH3ALQ9UNE2 315 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ABCG2Q9UNQ0 655 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 PPP2R2CQ9Y2T4 447 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 AMDHD2Q9Y303 409 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 KPTNQ9Y664 436 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ADCY9O60503 1353 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ANKRD31Q8N7Z5 1873 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 GOLGA8QA0A0J9YX86 632 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ERICH2A1L162 156 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 A8MU76 341 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 A8MXQ7 604 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 POLR1CO15160 346 aaPredicted RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SIGLEC5O15389 551 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 PRKAB2O43741 272 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 RAMP3O60896 148 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DIRAS1O95057 198 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 KLHL2O95198 593 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SERPINB2P05120 415 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ANXA5P08758 320 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 LINC00271P0C7V0 271 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 PRPS2P11908 318 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DPEP1P16444 411 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SELEP16581 610 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DCKP27707 260 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 CD1CP29017 333 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ID1P41134 155 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 MATKP42679 507 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 GNPDA1P46926 289 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 NOVA1P51513 510 aaKnown RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 XGP55808 180 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 TNNC1P63316 161 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 CDK16Q00536 496 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC5A12Q1EHB4 618 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ISXQ2M1V0 245 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 XKR6Q5GH73 641 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DMRTC1Q5HYR2 192 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SOHLH1Q5JUK2 328 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 BEND6Q5SZJ8 279 aaPredicted RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SPECC1LQ69YQ0 1117 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 BHLHB9Q6PI77 547 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DOK6Q6PKX4 331 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ADAMTSL5Q6ZMM2 481 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 NET1Q7Z628 596 aaPredicted RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SCD5Q86SK9 330 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DCUN1D3Q8IWE4 304 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 GPALPP1Q8IXQ4 340 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 GPR65Q8IYL9 337 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 DND1Q8IYX4 353 aaKnown RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 GABRG1Q8N1C3 465 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 CENPSQ8N2Z9 138 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 TCEANCQ8N8B7 351 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms