RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 A0A087WUV0 522 aaPredicted RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 TTC36A6NLP5 189 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 ZNF785A8K8V0 405 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 POC1B-GALNT4F8VUJ3 575 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 ADAMDEC1O15204 470 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 SCO2O43819 266 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 TMCC2O75069 709 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 COQ9O75208 318 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 SOX30O94993 753 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 IGKV1D-16P01601 117 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 NGFRP08138 427 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 ABHD2P08910 425 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 TAC1P20366 129 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 KRT20P35900 424 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 CPOXP36551 454 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 NCBP2P52298 156 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 FOXA1P55317 472 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 CKAP4Q07065 602 aaKnown RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 ZNF763Q0D2J5 394 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 C17orf67Q0P5P2 114 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 C2orf80Q0P641 193 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 DYRK1AQ13627 763 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 DECR1Q16698 335 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 WHAMMP3Q1A5X7 153 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 CTU2Q2VPK5 515 aaKnown RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 TMEM107Q6UX40 140 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 STAC2Q6ZMT1 411 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 TAOK1Q7L7X3 1001 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 CHMP1BQ7LBR1 199 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 P4HA3Q7Z4N8 544 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 YTHDF3Q7Z739 585 aaKnown RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 MARCH3Q86UD3 253 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 SLC22A9Q8IVM8 553 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 UBQLNLQ8IYU4 475 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 ADGRG5Q8IZF4 528 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 NOA1Q8NC60 698 aaKnown RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 TOR1AIP2Q8NFQ8 470 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 OR5M1Q8NGP8 315 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 OR4C3Q8NH37 302 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 GIMAP5Q96F15 307 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 PIK3IP1Q96FE7 263 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 METTL2AQ96IZ6 378 aaKnown RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 EGLN2Q96KS0 407 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 FAM111AQ96PZ2 611 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 BBS4Q96RK4 519 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 KCNA7Q96RP8 456 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 FMO2Q99518 471 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 NPAS1Q99742 590 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 EBPLQ9BY08 206 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 OR10A4Q9H209 315 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 PTGES2Q9H7Z7 377 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 MYNNQ9NPC7 610 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 PFDN4Q9NQP4 134 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 GIMAP4Q9NUV9 329 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 VSX1Q9NZR4 365 aaPredicted RBP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 NFU1Q9UMS0 254 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 STK38LQ9Y2H1 464 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 OR10H1Q9Y4A9 318 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
PRPF40A-210ENST00000489741 CUBNO60494 3623 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 EXPH5Q8NEV8 1989 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 A0A087WZY1 265 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 GXYLT2A0PJZ3 443 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 CCDC151A5D8V7 595 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 TRIM64A6NGJ6 449 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 TRIM64BA6NI03 449 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 G3V2L1 256 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 MGST3O14880 152 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 SEC14L5O43304 696 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 TBX19O60806 448 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 SS18L1O75177 396 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 NKX2-2O95096 273 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 UTS2O95399 124 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 ANGPTL1O95841 491 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 PLAUP00749 431 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 GSTA1P08263 222 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 PPP3CBP16298 524 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 TCEA1P23193 301 aaKnown RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 PRPH2P23942 346 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 HMOX2P30519 316 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 GABRA3P34903 492 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 FRKP42685 505 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 ELLP55199 621 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 RPS3AP61247 264 aaKnown RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 SIRPAP78324 504 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 BTKQ06187 659 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 KRTAP1-1Q07627 177 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 ZNF155Q12901 538 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 GRAMD1BQ3KR37 738 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 GLE1Q53GS7 698 aaKnown RBP5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 BEX5Q5H9J7 111 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 TEX35Q5T0J7 233 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 CPTPQ5TA50 214 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 LGSNQ5TDP6 509 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 RAET1LQ5VY80 246 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 ADAM5Q6NVV9 412 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 NOXRED1Q6NXP6 359 aa5.66□□□□□ -1.5
PRPF40A-210ENST00000489741 Q6ZSR9 355 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms