RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SPATA5L1Q9BVQ7 753 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TAPBPLQ9BX59 468 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 SLC38A1Q9H2H9 487 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 COQ10BQ9H8M1 238 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 NPHS2Q9NP85 383 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM45AQ9NWC5 275 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 KCNE5Q9UJ90 142 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 DCTN4Q9UJW0 460 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF443Q9Y2A4 671 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 GPR52Q9Y2T5 361 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TMED7Q9Y3B3 224 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 F8P00451 2351 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 ARHGAP21Q5T5U3 1957 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 DNPH1O43598 174 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CYTIPO60759 359 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 KRT33AO76009 404 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 THBS1P07996 1170 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CRYGSP22914 178 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 TACR3P29371 465 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 HOXC12P31275 282 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 GUSBP1Q15486 140 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 RGNQ15493 299 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 STK11Q15831 433 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CYP51A1Q16850 503 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 GTDC1Q4AE62 458 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF311Q5JNZ3 666 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 RPS26P11Q5JNZ5 115 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-232ENST00000489053 WBP2NLQ6ICG8 309 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 SPNS3Q6ZMD2 512 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF836Q6ZNA1 936 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 MTDHQ86UE4 582 aaKnown RBP8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CXorf67Q86X51 503 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-232ENST00000489053 P3H2Q8IVL5 708 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 RNF217Q8TC41 542 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 SLC38A5Q8WUX1 472 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 GTF2H4Q92759 462 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 PIGTQ969N2 578 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 APH1AQ96BI3 265 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-232ENST00000489053 ZG16BQ96DA0 208 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 MUCL1Q96DR8 90 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 DNAJA3Q96EY1 480 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 DOCK7Q96N67 2140 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 ALPK1Q96QP1 1244 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF607Q96SK3 696 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CCL19Q99731 98 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 FOXC2Q99958 501 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
HDAC6-232ENST00000489053 EBF4Q9BQW3 602 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CCDC106Q9BWC9 280 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 LIME1Q9H400 295 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 A4GALTQ9NPC4 353 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 MRGBPQ9NV56 204 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 PARPBPQ9NWS1 579 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM181Q9P2C4 612 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 NOSIPQ9Y314 301 aaKnown RBP8.13□□□□□ -1.11
HDAC6-232ENST00000489053 PCDHB14Q9Y5E9 798 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 HCFC1P51610 2035 aa8.13□□□□□ -1.11
HDAC6-232ENST00000489053 CIB4A0PJX0 185 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 FAM221AA4D161 298 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 CDHR4A6H8M9 788 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PRORSD1PA6NEY8 169 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 CCT8L1PA6NM43 557 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF724A8MTY0 619 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ETV2O00321 342 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 AP3D1O14617 1153 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SMAD9O15198 467 aaKnown RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 CLOCKO15516 846 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ARHGEF9O43307 516 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF208O43345 1280 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 EFNA2O43921 213 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SMPD2O60906 423 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 MRPL33O75394 65 aaKnown RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SERPINB7O75635 380 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PMS2P2O95744 297 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ADAP00813 363 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 GPIP06744 558 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 TFPTP0C1Z6 253 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 GKN3PP0CG01 181 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PSMB1P20618 241 aaKnown RBP8.12□□□□□ -1.11
HDAC6-232ENST00000489053 SLC6A2P23975 617 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 CCKARP32238 428 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 IDUAP35475 653 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ATP4BP51164 291 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 IL1RL1Q01638 556 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 EPS8Q12929 822 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ITGADQ13349 1161 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 DEFB113Q30KQ7 82 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 RNF220Q5VTB9 566 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PRAMEF8Q5VWM4 474 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 PRAMEF7Q5VXH5 474 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 REEP3Q6NUK4 255 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 BLOC1S3Q6QNY0 202 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 CASP12Q6UXS9 341 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 TFAP2EQ6VUC0 442 aa8.12□□□□□ -1.11
HDAC6-232ENST00000489053 STAC2Q6ZMT1 411 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms