RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 UBDO15205 165 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 IL7RP16871 459 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 CCNA2P20248 432 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 MVDP53602 400 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 ITGADQ13349 1161 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 TAB1Q15750 504 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 MAPK11Q15759 364 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 AGBL2Q5U5Z8 902 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 MTDHQ86UE4 582 aaKnown RBP20.39■□□□□ 0.85
COL9A3-213ENST00000489045 LSRQ86X29 649 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-213ENST00000489045 ADGRG3Q86Y34 549 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 ZHX1-C8orf76Q96EF9 292 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 TMEM204Q9BSN7 226 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 P2RX2Q9UBL9 471 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 HDGFL3Q9Y3E1 203 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 USH1CQ9Y6N9 552 aa20.39■□□□□ 0.85
COL9A3-213ENST00000489045 ANP32DO95626 131 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 PMS2P2O95744 297 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 DBIP07108 87 aaKnown RBP20.38■□□□□ 0.85
COL9A3-213ENST00000489045 ETFAP13804 333 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 POLR2JP52435 117 aaKnown RBP20.38■□□□□ 0.85
COL9A3-213ENST00000489045 GNA13Q14344 377 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 GTDC1Q4AE62 458 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 MRPL2Q5T653 305 aaKnown RBP20.38■□□□□ 0.85
COL9A3-213ENST00000489045 MSANTD1Q6ZTZ1 278 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 BHLHA15Q7RTS1 189 aaPredicted RBP20.38■□□□□ 0.85
COL9A3-213ENST00000489045 GALNT5Q7Z7M9 940 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 PERPQ96FX8 193 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 RMND5AQ9H871 391 aa20.38■□□□□ 0.85
COL9A3-213ENST00000489045 LYZL6O75951 148 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 ZCCHC18P0CG32 403 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 FKBP2P26885 142 aaKnown RBP20.37■□□□□ 0.85
COL9A3-213ENST00000489045 CRATP43155 626 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 MAGEA8P43361 318 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 HTR3AP46098 478 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 CLK1P49759 484 aaKnown RBP20.37■□□□□ 0.85
COL9A3-213ENST00000489045 PEX5LQ8IYB4 626 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF100Q8IYN0 542 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 MIER2Q8N344 545 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 HSD17B8Q92506 261 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 PMM1Q92871 262 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 VPS33AQ96AX1 596 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 AURKBQ96GD4 344 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-213ENST00000489045 ITCHQ96J02 903 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 C18orf12Q96KH6 178 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 POTEKPQ9BYX7 375 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 TPT1P8Q9HAU6 139 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 EMC3Q9P0I2 261 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 OSGIN1Q9UJX0 560 aa20.37■□□□□ 0.85
COL9A3-213ENST00000489045 DSPPQ9NZW4 1301 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 IGKV3D-15A0A087WSY6 115 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 TMED7-TICAM2A0A0A6YYA0 188 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF716A6NP11 495 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 FAAHO00519 579 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 HS3ST1O14792 307 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 DNPH1O43598 174 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 BCHEP06276 602 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 TACR3P29371 465 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 POLR2HP52434 150 aaKnown RBP20.36■□□□□ 0.85
COL9A3-213ENST00000489045 OR2B6P58173 313 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 DSTNP60981 165 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 EPS8Q12929 822 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 CAPRIN1Q14444 709 aaKnown RBP20.36■□□□□ 0.85
COL9A3-213ENST00000489045 PDK3Q15120 406 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 EPGNQ6UW88 154 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 PIGXQ8TBF5 258 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 IGFBPL1Q8WX77 278 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 TMED7Q9Y3B3 224 aa20.36■□□□□ 0.85
COL9A3-213ENST00000489045 TMEM72A0PK05 275 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 CFAP73A6NFT4 308 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 UQCRBP14927 111 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 SLC1A3P43003 542 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 CRISP3P54108 245 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 C6orf10Q5SRN2 563 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 NCMAPQ5T1S8 102 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 SEZ6L2Q6UXD5 910 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF836Q6ZNA1 936 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 VRK2Q86Y07 508 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF611Q8N823 705 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 AKAP1Q92667 903 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL9A3-213ENST00000489045 DDIT4LQ96D03 193 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 C7orf26Q96N11 449 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 SMR3AQ99954 134 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 USB1Q9BQ65 265 aaKnown RBP20.35■□□□□ 0.85
COL9A3-213ENST00000489045 NGBQ9NPG2 151 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 RLIMQ9NVW2 624 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 CALML5Q9NZT1 146 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 TMEM181Q9P2C4 612 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 NOSIPQ9Y314 301 aaKnown RBP20.35■□□□□ 0.85
COL9A3-213ENST00000489045 RNF115Q9Y4L5 304 aa20.35■□□□□ 0.85
COL9A3-213ENST00000489045 FAM234BA2RU67 622 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 CDHR4A6H8M9 788 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF208O43345 1280 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 RAMP1O60894 148 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 TFPTP0C1Z6 253 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 COX5AP20674 150 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 IGHV1-2P23083 117 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 PTH2RP49190 550 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 STK11Q15831 433 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 LIN52Q52LA3 116 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms