RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 IL2RAP01589 272 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 OPN1LWP04000 364 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 TACR3P29371 465 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 EIF1AXP47813 144 aaKnown RBP16.71■□□□□ 0.27
PTCD3-217ENST00000488801 CPA2P48052 419 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 MAP2K6P52564 334 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 PSME3P61289 254 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 FXNQ16595 210 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 TMEM176BQ3YBM2 270 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-217ENST00000488801 HBMQ6B0K9 141 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 LSRQ86X29 649 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-217ENST00000488801 ALG2Q9H553 416 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 TMEM181Q9P2C4 612 aa16.71■□□□□ 0.27
PTCD3-217ENST00000488801 ZNF629Q9UEG4 869 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-217ENST00000488801 TMED7-TICAM2A0A0A6YYA0 188 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 TMEM72A0PK05 275 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 ELOVL7A1L3X0 281 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 A1L4Q6 167 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 FZD7O75084 574 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 TNFSF13O75888 250 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 CRHP06850 196 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 FCGR2AP12318 317 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 CTSSP25774 331 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 FKBP2P26885 142 aaKnown RBP16.7■□□□□ 0.26
PTCD3-217ENST00000488801 CLK1P49759 484 aaKnown RBP16.7■□□□□ 0.26
PTCD3-217ENST00000488801 GSK3BP49841 420 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 LIPEQ05469 1076 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 FOXF2Q12947 444 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 NPTX1Q15818 432 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 SLC25A35Q3KQZ1 300 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 ATG4DQ86TL0 474 aaPredicted RBP16.7■□□□□ 0.26
PTCD3-217ENST00000488801 SMYD1Q8NB12 490 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 OR10Q1Q8NGQ4 319 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 RNF128Q8TEB7 428 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 CA5BP1Q8WTZ4 195 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 CPNE4Q96A23 557 aaPredicted RBP16.7■□□□□ 0.26
PTCD3-217ENST00000488801 SFXN3Q9BWM7 321 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 C12orf10Q9HB07 376 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 SPAG4Q9NPE6 437 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 JKAMPQ9P055 326 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 TMED7Q9Y3B3 224 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 SPIN1Q9Y657 262 aaPredicted RBP16.7■□□□□ 0.26
PTCD3-217ENST00000488801 PRR14LQ5THK1 2151 aa16.7■□□□□ 0.26
PTCD3-217ENST00000488801 A0A1W2PNR3 127 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 NDUFAB1O14561 156 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 FMO6PO60774 539 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 NPIPB7O75200 414 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 TMIGD3P0DMS9 266 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-217ENST00000488801 IGFBP2P18065 325 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 GRNP28799 593 aaKnown RBP16.69■□□□□ 0.26
PTCD3-217ENST00000488801 RGS8P57771 180 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-217ENST00000488801 RAC3P60763 192 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 HOXC5Q00444 222 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 FBXL19-AS1Q494R0 122 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 PDSS1Q5T2R2 415 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 OR2A2Q6IF42 318 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 CHMP1BQ7LBR1 199 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 PGAM4Q8N0Y7 254 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 OR4D11Q8NGI4 311 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 RASSF5Q8WWW0 418 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 OSTF1Q92882 214 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 ARL5BQ96KC2 179 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 PCDHAC1Q9H158 963 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 SERINC1Q9NRX5 453 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 HDGFL3Q9Y3E1 203 aa16.69■□□□□ 0.26
PTCD3-217ENST00000488801 A0A0B4J2E0 115 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 A0A1B0GX12 115 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 A0A1W2PNV4 684 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 ZC3H12DA2A288 527 aaKnown RBP16.68■□□□□ 0.26
PTCD3-217ENST00000488801 PMS2P2O95744 297 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 FESP07332 822 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 CPOXP36551 454 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 CARD18P57730 90 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 COPZ1P61923 177 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 SGCBQ16585 318 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 TMPPEQ6ZT21 453 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 GCNT2Q8N0V5 402 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 BCAS4Q8TDM0 211 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 INTS12Q96CB8 462 aaKnown RBP16.68■□□□□ 0.26
PTCD3-217ENST00000488801 UCK2Q9BZX2 261 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 OR11A1Q9GZK7 315 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 NPDC1Q9NQX5 325 aaPredicted RBP16.68■□□□□ 0.26
PTCD3-217ENST00000488801 KLHL28Q9NXS3 571 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 MCTS1Q9ULC4 181 aaKnown RBP16.68■□□□□ 0.26
PTCD3-217ENST00000488801 CELSR2Q9HCU4 2923 aa16.68■□□□□ 0.26
PTCD3-217ENST00000488801 ALPK2Q86TB3 2170 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 A0A1B0GWA3 101 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 NKX2-6A6NCS4 301 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 FAM90A27PA6NNH2 459 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 C19orf84I3L1E1 186 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 M0R3H8 397 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 DVL2O14641 736 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 SMAD9O15198 467 aaKnown RBP16.67■□□□□ 0.26
PTCD3-217ENST00000488801 DNPH1O43598 174 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 T-ENOLP0DO92 83 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 HTR1EP28566 365 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 SLC7A1P30825 629 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 KDELR2P33947 212 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 OPRM1P35372 400 aa16.67■□□□□ 0.26
PTCD3-217ENST00000488801 KIR2DL2P43627 348 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms