RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SLC7A6OSQ96CW6 309 aaPredicted RBP9.93□□□□□ -0.82
UBE4B-210ENST00000488228 VKORC1Q9BQB6 163 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF559Q9BR84 538 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 SRXN1Q9BYN0 137 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 PCDHAC1Q9H158 963 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 RPS6KB2Q9UBS0 482 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 MAGEL2Q9UJ55 1249 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 BAG5Q9UL15 447 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 SLC9A8Q9Y2E8 581 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 SH3GLB1Q9Y371 365 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 SNX13Q9Y5W8 968 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 A0A0B4J2E0 115 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 A0A1B0GX12 115 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ZC3H12DA2A288 527 aaKnown RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 CLEC18AA5D8T8 446 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 SLC22A20A6NK97 555 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 TGM6O95932 706 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 LDLRP01130 860 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 C8BP07358 591 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 TFPIP10646 304 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 KLK2P20151 261 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 SLC7A1P30825 629 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 PTGER4P35408 488 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 APOBEC1P41238 236 aaKnown RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 HTR3AP46098 478 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 BNIP1Q12981 228 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 PON3Q15166 354 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 OR1Q1Q15612 314 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 NSUN5P2Q63ZY6 315 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 HBMQ6B0K9 141 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 GLYATQ6IB77 296 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 CLEC18BQ6UXF7 455 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ESPNLQ6ZVH7 1005 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 CBLL1Q75N03 491 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ADGRE4PQ86SQ3 457 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ATG4DQ86TL0 474 aaPredicted RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 FAM26EQ8N5C1 309 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 C9orf106Q8NAJ2 232 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 CLEC18CQ8NCF0 446 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 NAXEQ8NCW5 288 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 FNDC9Q8TBE3 224 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ZPLD1Q8TCW7 415 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 PHF10Q8WUB8 498 aaKnown RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 SLC25A43Q8WUT9 341 aaPredicted RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ARL5BQ96KC2 179 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 OR5B2Q96R09 309 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 MCHR1Q99705 422 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 TTYH2Q9BSA4 534 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 TRIM2Q9C040 744 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ADAM19Q9H013 955 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 ADPRHL2Q9NX46 363 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 PRPF19Q9UMS4 504 aaKnown RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 SPIN1Q9Y657 262 aaPredicted RBP9.92□□□□□ -0.82
UBE4B-210ENST00000488228 HCFC1P51610 2035 aa9.92□□□□□ -0.82
UBE4B-210ENST00000488228 HECTD1Q9ULT8 2610 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 IGHV3-15A0A0B4J1V0 119 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 CD8B2A6NJW9 211 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 ELOA3DA6NLF2 546 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-210ENST00000488228 GJE1A6NN92 205 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 AHRRA9YTQ3 701 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 ADAMDEC1O15204 470 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 GYG2O15488 501 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 FMO6PO60774 539 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 TOXO94900 526 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 CXCR1P25024 350 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 PER3P56645 1201 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 RPS3AP61247 264 aaKnown RBP9.91□□□□□ -0.82
UBE4B-210ENST00000488228 SELENOWP63302 87 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 PMPCAQ10713 525 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 MYBPHQ13203 477 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 CDSNQ15517 529 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 SGCBQ16585 318 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 ELOA3BQ3SY89 546 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 DNAL1Q4LDG9 190 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 ALG10BQ5I7T1 473 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 ENTPD8Q5MY95 495 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 CYP2R1Q6VVX0 501 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 CHMP1BQ7LBR1 199 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 CCDC71Q8IV32 467 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-210ENST00000488228 P3H2Q8IVL5 708 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 GCNT2Q8N0V5 402 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 EID3Q8N140 333 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 LSMEM1Q8N8F7 131 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 ELOA3Q8NG57 546 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 LZICQ8WZA0 190 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 THTPAQ9BU02 230 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 C1orf21Q9H246 121 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 SERINC1Q9NRX5 453 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 STOML1Q9UBI4 398 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 FREM1Q5H8C1 2179 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 COL12A1Q99715 3063 aa9.91□□□□□ -0.82
UBE4B-210ENST00000488228 IGKV1D-42A0A075B6H8 117 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 A0A0G2JNJ9 132 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 MBD3L4A6NDZ8 208 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 MBD3L3A6NE82 208 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 MBD3L5A6NJ08 208 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 GMNNO75496 209 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 AQP8O94778 261 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 LYPD3O95274 346 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms