RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 E2F1Q01094 437 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 FUT7Q11130 342 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 FAAH2Q6GMR7 532 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ARL14Q8N4G2 192 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 OR5M3Q8NGP4 307 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 C16orf52Q8NHV5 167 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 SGTBQ96EQ0 304 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF285Q96NJ3 590 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 B3GAT2Q9NPZ5 323 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 LRIT1Q9P2V4 623 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ICAM5Q9UMF0 924 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ERVK-19Q9WJR5 959 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 HTR3EA5X5Y0 456 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 HMX3A6NHT5 357 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 PROS1P07225 676 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 MAOAP21397 527 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 SHC1P29353 583 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 GABRA4P48169 554 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 OR12D2P58182 307 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 IDNKQ5T6J7 187 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 BCORP1Q8N888 145 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 OR52E2Q8NGJ4 325 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 ENKURQ8TC29 256 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 ZC3HAV1LQ96H79 300 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 OR10A5Q9H207 317 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 PPIL3Q9H2H8 161 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 RNF121Q9H920 327 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 MARCH7Q9H992 704 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 UCK1Q9HA47 277 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 KLHL21Q9UJP4 597 aa16.52■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A087WUJ7 227 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SERINC4A6NH21 518 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM25AB3EWG3 89 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM25CB3EWG5 89 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM25GB3EWG6 89 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 GNB5O14775 395 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 CSTAP01040 98 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 CSF2P04141 144 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 MAP2K3P46734 347 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 PGDP52209 483 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC3A1Q07837 685 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 ELOCQ15369 112 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 NNATQ16517 81 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 NDUFAF6Q330K2 333 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 PRR23CQ6ZRP0 262 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SYT13Q7L8C5 426 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 TPRA1Q86W33 373 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 C17orf47Q8NEP4 570 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 ABHD4Q8TB40 342 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SMAP2Q8WU79 429 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 KCTD12Q96CX2 325 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 ST6GAL2Q96JF0 529 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 PGLYRP3Q96LB9 341 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 FRMD6Q96NE9 622 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 UBL7Q96S82 380 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 TMEM43Q9BTV4 400 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 OR10H1Q9Y4A9 318 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 NOX1Q9Y5S8 564 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 TDRD6O60522 2096 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 OR2W5A6NFC9 320 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 LILRA5A6NI73 299 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SC5DO75845 299 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 HIST1H1CP16403 213 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 ELK1P19419 428 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 MYL9P24844 172 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 HSD17B7P56937 341 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 QPRTQ15274 297 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 DMKNQ6E0U4 476 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SSX6Q7RTT6 188 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 PXKQ7Z7A4 578 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM160A2Q8N612 972 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 ZNF615Q8N8J6 731 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM98AQ8NCA5 519 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 SDR9C7Q8NEX9 313 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 OR4C3Q8NH37 302 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 RLN3Q8WXF3 142 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 MMABQ96EY8 250 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 C2orf42Q9NWW7 574 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 PLCL2Q9UPR0 1127 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 IER3IP1Q9Y5U9 82 aa16.51■□□□□ 0.23
PDLIM7-207ENST00000486828 MCIDASD6RGH6 385 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 PPM1BO75688 479 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 GALNSP34059 522 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 MLLT3P42568 568 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 NRG3P56975 720 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 GGTLC2Q14390 218 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 MZT2BQ6NZ67 158 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 CEACAM19Q7Z692 300 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 UBE2J2Q8N2K1 259 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 OR5J2Q8NH18 312 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 OR4K13Q8NH42 304 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC38A3Q99624 504 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 KCNJ15Q99712 375 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 RBFOX1Q9NWB1 397 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 EXTL2Q9UBQ6 330 aa16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 RBMX2Q9Y388 322 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-207ENST00000486828 N6AMT1Q9Y5N5 214 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms