RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ZNF208O43345 1280 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SUSD5O60279 629 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 FZD7O75084 574 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TRAPPC6AO75865 159 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 IGF2P01344 180 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 CRYABP02511 175 aaKnown RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 FPR1P21462 350 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TCEA1P23193 301 aaKnown RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 CHMP24386 653 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 DNAJA1P31689 397 aaKnown RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 UGT2B15P54855 530 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 LSM11P83369 360 aaKnown RBP eCLIP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ALDH6A1Q02252 535 aaKnown RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TOMM20Q15388 145 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 EXOC3L2Q2M3D2 409 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 FGD3Q5JSP0 725 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF770Q6IQ21 691 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 PODNL1Q6PEZ8 512 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SHQ1Q6PI26 577 aaKnown RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TMEM179BQ7Z7N9 219 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TEX19Q8NA77 164 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 OR52J3Q8NH60 311 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 NEIL3Q8TAT5 605 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SLC25A43Q8WUT9 341 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TMEM239Q8WW34 195 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ACOT11Q8WXI4 607 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SFXN2Q96NB2 322 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 ALPK1Q96QP1 1244 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 BARD1Q99728 777 aaKnown RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 PSD2Q9BQI7 771 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 BDH2Q9BUT1 245 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 PTDSS2Q9BVG9 487 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SLC19A3Q9BZV2 496 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 MEPEQ9NQ76 525 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 SELENONQ9NZV5 590 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 NKX1-2Q9UD57 310 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-227ENST00000486806 U3KQV3 271 aa8.64□□□□□ -1.03
MCF2L-227ENST00000486806 TRGV5A0A0B4J1U4 118 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 ZC3H12DA2A288 527 aaKnown RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 A8MVM7 634 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 CASQ2O14958 399 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 ATXN7O15265 892 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 PIP5K1CO60331 668 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 HCN1O60741 890 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 WISP2O76076 250 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 ATP6V1G2O95670 118 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 PTNP21246 168 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 CXCR1P25024 350 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SHC1P29353 583 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 LHX2P50458 406 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 TDGF1P3P51864 188 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 CTBP2P56545 445 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 RAC1P63000 192 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 PPP1R8Q12972 351 aaKnown RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SLC10A1Q14973 349 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 LAPTM4AQ15012 233 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 MICAQ29983 383 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 CTU2Q2VPK5 515 aaKnown RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 PRR30Q53SZ7 412 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SYT14P1Q58G82 188 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 DCST1Q5T197 706 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 POMZP3Q6PJE2 187 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 FAM180AQ6UWF9 173 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 C5orf46Q6UWT4 87 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 MBOAT2Q6ZWT7 520 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 GGNQ86UU5 652 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 NRMQ8IXM6 262 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 RNF113BQ8IZP6 322 aaKnown RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 HS3ST5Q8IZT8 346 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 OR4K5Q8NGD3 323 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 OR9Q2Q8NGE9 314 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 OR5K1Q8NHB7 308 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 PFN4Q8NHR9 129 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 STK35Q8TDR2 534 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 NRBF2Q96F24 287 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 ADGRG7Q96K78 797 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 HS6ST2Q96MM7 605 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 GPR137Q96N19 417 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SLX1AQ9BQ83 275 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 OR11A1Q9GZK7 315 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 GABARAPL1Q9H0R8 117 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 TSPAN10Q9H1Z9 355 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SEMA6AQ9H2E6 1030 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 TMEM185BQ9H7F4 350 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SPRR3Q9UBC9 169 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 OAZ3Q9UMX2 235 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SLC6A5Q9Y345 797 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF337Q9Y3M9 751 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 SPIN1Q9Y657 262 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-227ENST00000486806 AP4B1Q9Y6B7 739 aa8.63□□□□□ -1.03
MCF2L-227ENST00000486806 TRAV36DV7A0A075B6V5 113 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 ENO4A6NNW6 628 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 FTCDNL1E5RQL4 147 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 NPIPA5E9PKD4 350 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 H3BML4 177 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 KPNA4O00629 521 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms