RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 RHAGQ02094 409 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PLGLB1Q02325 96 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SPOCK1Q08629 439 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 NAB1Q13506 487 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PDK3Q15120 406 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 AP5B1Q2VPB7 878 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 BEX5Q5H9J7 111 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 KHDC1LQ5JSQ8 128 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 C11orf63Q6NUN7 778 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 NIPAL1Q6NVV3 410 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF585AQ6P3V2 769 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PAMR1Q6UXH9 720 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 C3orf62Q6ZUJ4 267 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 KCTD8Q6ZWB6 473 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 LDB1Q86U70 411 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CXorf67Q86X51 503 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SLC13A5Q86YT5 568 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PLD3Q8IV08 490 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 NUDCD3Q8IVD9 361 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CYP4Z2PQ8N1L4 340 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 RPRMLQ8N4K4 120 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 TC2NQ8N9U0 490 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 FAM47BQ8NA70 645 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 WFDC11Q8NEX6 87 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 OR52N2Q8NGI0 321 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 FAM222BQ8WU58 562 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PYDC1Q8WXC3 89 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ARSGQ96EG1 525 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PEX11GQ96HA9 241 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PLEKHA8Q96JA3 519 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF48Q96MX3 618 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PWWP2AQ96N64 755 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PRAP1Q96NZ9 151 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SMR3AQ99954 134 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CITED1Q99966 193 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PIGQQ9BRB3 760 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 LRRC1Q9BTT6 524 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PAPOLGQ9BWT3 736 aaKnown RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 POTEKPQ9BYX7 375 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 P2RY12Q9H244 342 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SYNPO2LQ9H987 977 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 TNFRSF12AQ9NP84 129 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ABHD10Q9NUJ1 306 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 INTS9Q9NV88 658 aaKnown RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 EXD2Q9NVH0 621 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PDP1Q9P0J1 537 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 B4GALT7Q9UBV7 327 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SLC25A10Q9UBX3 287 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CGGBP1Q9UFW8 167 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 WARS2Q9UGM6 360 aaKnown RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ENPP5Q9UJA9 477 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 FAM32AQ9Y421 112 aaKnown RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SLC22A7Q9Y694 548 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF469Q96JG9 3925 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ARHGAP21Q5T5U3 1957 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ATRQ13535 2644 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 A0A0G2JNJ9 132 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 FAM240BA0A1B0GVZ2 78 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 KDM4EB2RXH2 506 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 E7ENX8 843 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 E7ESA3 106 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 H7C1Q1 480 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 PFDN1O60925 122 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 WDR1O75083 606 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 NDUFS6O75380 124 aaKnown RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 RDH16O75452 317 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ZFPL1O95159 310 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SLC16A8O95907 504 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SYF2O95926 243 aaKnown RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 STATHP02808 62 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SLC35G6P0C7Q6 338 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 GLI4P10075 376 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 EGR1P18146 543 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ATP6V1C1P21283 382 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 UCP1P25874 307 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 UQCRC1P31930 480 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 APOBEC3AP31941 199 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 IFNA8P32881 189 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 FDFT1P37268 417 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 KCNJ1P48048 391 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ARFIP2P53365 341 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 MANFP55145 182 aaKnown RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 CDH15P55291 814 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SESN2P58004 480 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 IRF9Q00978 393 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 DAZAP2Q15038 168 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF385BQ569K4 471 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 PCID2Q5JVF3 399 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 PYHIN1Q6K0P9 492 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 RGS7BPQ6MZT1 257 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 CDC73Q6P1J9 531 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 KIAA0408Q6ZU52 694 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 CXXC5Q7LFL8 322 aaKnown RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 PRSS41Q7RTY9 318 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 VN1R4Q7Z5H5 301 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 WDR53Q7Z5U6 358 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 YRDCQ86U90 279 aaKnown RBP6.18□□□□□ -1.42
HDAC3-209ENST00000486618 EXOC3L1Q86VI1 746 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SLC22A16Q86VW1 577 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms