RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 LAT2Q9GZY6 243 aa13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 DSN1Q9H410 356 aa13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 FKBP14Q9NWM8 211 aa13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 TVP23BQ9NYZ1 205 aa13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 CNOT2Q9NZN8 540 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 RSL24D1Q9UHA3 163 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 NPFFR2Q9Y5X5 522 aa13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 KCNMB2Q9Y691 235 aa13.34□□□□□ -0.27
POLR2J3-204ENST00000486319 LOC102723996A0A087X1L8 192 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 TRBV11-1A0A0K0K1C0 115 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 EFCAB10A6NFE3 127 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 M0R129 80 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 EIF4E2O60573 245 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 KLF7O75840 302 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 ZFAND5O76080 213 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 PCMT1P22061 227 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 EMX1Q04741 257 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 ACSM5Q6NUN0 579 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 APOOLQ6UXV4 268 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 FAM26EQ8N5C1 309 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 IQCF1Q8N6M8 205 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 TCEANCQ8N8B7 351 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 GATSQ8NAP1 163 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 PFN4Q8NHR9 129 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 BRIX1Q8TDN6 353 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 SIGLEC11Q96RL6 698 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 IL4I1Q96RQ9 567 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 TSSK6Q9BXA6 273 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 TBL1XR1Q9BZK7 514 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 CARD8Q9Y2G2 431 aa13.33□□□□□ -0.28
POLR2J3-204ENST00000486319 A0A087WUJ7 227 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 ZNF99A8MXY4 864 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 ZNF701M0R085 212 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 CDC42EP2O14613 210 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 NDUFB5O43674 189 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 PPM1BO75688 479 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 SEC14L2O76054 403 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 RCBTB2O95199 551 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 IGHEP01854 428 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 MT-ND2P03891 347 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 CDK1P06493 297 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 NAGAP17050 411 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 BMP7P18075 431 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 MAKP20794 623 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 NUDT6P53370 316 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 C19orf57Q0VDD7 668 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 SSPNQ14714 243 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 SNAPC1Q16533 368 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 CYP4Z2PQ8N1L4 340 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 STX19Q8N4C7 294 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 TMCO5AQ8N6Q1 288 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 OR2T33Q8NG76 320 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 OR8D4Q8NGM9 314 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 ZNF420Q8TAQ5 688 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 RORBQ92753 470 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 MUL1Q969V5 352 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 SLC19A3Q9BZV2 496 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 YIPF3Q9GZM5 350 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 CXorf56Q9H5V9 222 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 MEPEQ9NQ76 525 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 C20orf141Q9NUB4 165 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 PTRH2Q9Y3E5 179 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 RPL36Q9Y3U8 105 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 PIEZO2Q9H5I5 2752 aa13.32□□□□□ -0.28
POLR2J3-204ENST00000486319 KALRNO60229 2985 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 MPDZO75970 2070 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 EFCAB9A8MZ26 197 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 KPNA4O00629 521 aaPredicted RBP13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 TLX2O43763 284 aaPredicted RBP13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 ENTPD6O75354 484 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 HMGN1P05114 100 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 SAGP10523 405 aaPredicted RBP13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 PNMTP11086 282 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 PIPP12273 146 aaPredicted RBP13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 FOLR3P41439 243 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 CCR4P51679 360 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 EFNB1P98172 346 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 GTF2IRD2BQ6EKJ0 949 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 CBLN3Q6UW01 205 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 GTF2IRD2Q86UP8 949 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 MISPQ8IVT2 679 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 SLC43A2Q8N370 569 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 ZNF843Q8N446 348 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 OR2Y1Q8NGV0 311 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 ADAMTS17Q8TE56 1095 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 FAR1Q8WVX9 515 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 FCGR1BQ92637 280 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 C3orf49Q96BT1 292 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 MESP1Q9BRJ9 268 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 RHNO1Q9BSD3 238 aa13.31□□□□□ -0.28
POLR2J3-204ENST00000486319 LHPPQ9H008 270 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms