RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PPP2R2AP63151 447 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 CSNK2A1P68400 391 aaPredicted RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 H3F3AP84243 136 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 PLAURQ03405 335 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 EPS8Q12929 822 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 FADDQ13158 208 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 P2RY6Q15077 328 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 RGNQ15493 299 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SYPL1Q16563 259 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 GPAT3Q53EU6 434 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SYT14P1Q58G82 188 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 COX20Q5RI15 118 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 TMEM201Q5SNT2 666 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 LRIF1Q5T3J3 769 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 C1QTNF12Q5T7M4 302 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 METTL21CQ5VZV1 264 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 STAC2Q6ZMT1 411 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 FCRLAQ7L513 359 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 PEX5LQ8IYB4 626 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ARFGAP2Q8N6H7 521 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 GOLGA6L1Q8N7Z2 621 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ZNF614Q8N883 585 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ANKFN1Q8N957 763 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ZNF837Q96EG3 531 aaPredicted RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 MAGEB18Q96M61 343 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ALPK1Q96QP1 1244 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 PIP5K1AQ99755 562 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 PSD2Q9BQI7 771 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SIKE1Q9BRV8 207 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 POTEKPQ9BYX7 375 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 PAIP1Q9H074 479 aaKnown RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 RABEP2Q9H5N1 569 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 EVA1AQ9H8M9 152 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 BCL2L10Q9HD36 194 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SLCO1B3Q9NPD5 702 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SLC6A13Q9NSD5 602 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 INTS9Q9NV88 658 aaKnown RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 KLHL9Q9P2J3 617 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 KLHL13Q9P2N7 655 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 P2RX2Q9UBL9 471 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 CHRNA9Q9UGM1 479 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ING1Q9UK53 422 aaPredicted RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 ZNF232Q9UNY5 417 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ZFHX3Q15911 3703 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 USF3Q68DE3 2245 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 IGKV3D-15A0A087WSY6 115 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 A0A096LPI6 279 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 A0A1W2PP18 115 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 CDHR4A6H8M9 788 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 DEFB108AA8MXU0 73 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SULT2B1O00204 365 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 CLIC1O00299 241 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 GPR171O14626 319 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 KLF4O43474 513 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 EIF1BO60739 113 aaKnown RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 TMCC2O75069 709 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 GCM2O75603 506 aaPredicted RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 ANP32DO95626 131 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 C1QCP02747 245 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 OPN1LWP04000 364 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 RAF1P04049 648 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 GSNP06396 782 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 THBS1P07996 1170 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 ETS2P15036 469 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 GPX2P18283 190 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 PPIBP23284 216 aaKnown RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 LOXP28300 417 aaPredicted RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 AGTR1P30556 359 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SLC7A1P30825 629 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SFTPDP35247 375 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 ACAA2P42765 397 aaKnown RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 CRATP43155 626 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 DIO1P49895 249 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SLC16A1P53985 500 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 AQP5P55064 265 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 CASP9P55211 416 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 DSTNP60981 165 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 STX1BP61266 288 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SIRPAP78324 504 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 HPCAP84074 193 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 RASGEF1BQ0VAM2 473 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 MERTKQ12866 999 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 NDUFAF6Q330K2 333 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 RNF220Q5VTB9 566 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 DNAJC14Q6Y2X3 702 aaPredicted RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 C22orf34Q6ZV56 151 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 ZNF550Q7Z398 422 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 TUSC5Q8IXB3 177 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 GABRG1Q8N1C3 465 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 STEAP2Q8NFT2 490 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 RFWD2Q8NHY2 731 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 ZNF563Q8TA94 476 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SLC38A5Q8WUX1 472 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 WDR60Q8WVS4 1066 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 ROBO4Q8WZ75 1007 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 HSD17B8Q92506 261 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 CNOT9Q92600 299 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms