RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 CARD8Q9Y2G2 431 aa5.12□□□□□ -1.59
CUX1-208ENST00000485792 RPH3AQ9Y2J0 694 aaPredicted RBP5.12□□□□□ -1.59
CUX1-208ENST00000485792 WDR45Q9Y484 360 aa5.12□□□□□ -1.59
CUX1-208ENST00000485792 FLNAP21333 2647 aaKnown RBP5.12□□□□□ -1.59
CUX1-208ENST00000485792 A0A0G2JPF8 293 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 HNRNPCL2B2RXH8 293 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 HNRNPCL3B7ZW38 293 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 PRSS44E7EML9 344 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 SLC22A2O15244 555 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 TPST2O60704 377 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 HNRNPCL1O60812 293 aaKnown RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 NPIPB7O75200 414 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 AQP8O94778 261 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 BPNT1O95861 308 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 NPPAP01160 153 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 OPN1LWP04000 364 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 HNRNPCL4P0DMR1 293 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 CD8BP10966 210 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 UBL4AP11441 157 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 PRG2P13727 222 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ETFAP13804 333 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ETS2P15036 469 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ATP6V1C1P21283 382 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 FKBP2P26885 142 aaKnown RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 SOAT1P35610 550 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 RFX3P48380 749 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 CLK1P49759 484 aaKnown RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 MAP2K6P52564 334 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 EEFSECP57772 596 aaKnown RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 SESN3P58005 492 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 RAC3P60763 192 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 SORDQ00796 357 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 DAZAP2Q15038 168 aaPredicted RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 GPR68Q15743 365 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 SPDYE7PQ495Y7 208 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 GLIPR1L2Q4G1C9 344 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ZBTB37Q5TC79 503 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 C8orf82Q6P1X6 216 aaPredicted RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 BEND4Q6ZU67 534 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 EIF3MQ7L2H7 374 aaKnown RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 ATG4DQ86TL0 474 aaPredicted RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 CALHM3Q86XJ0 350 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ADGRG3Q86Y34 549 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 PTOV1Q86YD1 416 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 OR4D11Q8NGI4 311 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 FBXO27Q8NI29 283 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 PHOSPHO1Q8TCT1 267 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 CA5BP1Q8WTZ4 195 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 FBLIM1Q8WUP2 373 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 DYDC1Q8WWB3 177 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 NRGNQ92686 78 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 MAL2Q969L2 176 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 RNF145Q96MT1 663 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ANKRD27Q96NW4 1050 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 SLC39A3Q9BRY0 314 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 ACBD3Q9H3P7 528 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 KAT8Q9H7Z6 458 aaKnown RBP5.11□□□□□ -1.59
CUX1-208ENST00000485792 KCNJ16Q9NPI9 418 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 SAR1AQ9NR31 198 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 PLSCR4Q9NRQ2 329 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 CCDC167Q9P0B6 97 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 KLHL14Q9P2G3 628 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 KCNN3Q9UGI6 736 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 DKKL1Q9UK85 242 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 VDAC3Q9Y277 283 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 CR1P17927 2039 aa5.11□□□□□ -1.59
CUX1-208ENST00000485792 IGKV3D-15A0A087WSY6 115 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 A0A1W2PNV4 684 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ZC3H12DA2A288 527 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 FAM90A27PA6NNH2 459 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 H3BNH8 94 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 DVL2O14641 736 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ZNF208O43345 1280 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 FRS3O43559 492 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 DNPH1O43598 174 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 SS18L1O75177 396 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 LYPD3O95274 346 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 PGM3O95394 542 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CSTAP01040 98 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 THY1P04216 161 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 DBIP07108 87 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 HPGDP15428 266 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 PGCP20142 388 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 PPIBP23284 216 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 HTR2AP28223 471 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 LOXP28300 417 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 GCKP35557 465 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CHI3L1P36222 383 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 PEX19P40855 299 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 APOBEC1P41238 236 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 SLC1A3P43003 542 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ASCL1P50553 236 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ANXA11P50995 505 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 DSTNP60981 165 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 RBBP4Q09028 425 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 EPS8Q12929 822 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 SELENBP1Q13228 472 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CBFBQ13951 182 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 PDK3Q15120 406 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 QPRTQ15274 297 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms