RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PRAMEF27A3QJZ7 478 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 WDR91A4D1P6 747 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 C9JVG2 144 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 RGS16O15492 202 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 BCAS1O75363 584 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 MAP2K6P52564 334 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 LRRC74AQ0VAA2 488 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 KRT71Q3SY84 523 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 TNFAIP8L2Q6P589 184 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF563Q8TA94 476 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 RAB8BQ92930 207 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF775Q96BV0 537 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 TRNT1Q96Q11 434 aaKnown RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 SLCO5A1Q9H2Y9 848 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 CISD1Q9NZ45 108 aaKnown RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 NOSIPQ9Y314 301 aaKnown RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 HMGN4O00479 90 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF208O43345 1280 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 CRLF1O75462 422 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 TFPIP10646 304 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 S100A3P33764 101 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 CHI3L1P36222 383 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 MAGEA8P43361 318 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 H3F3AP84243 136 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 PLAURQ03405 335 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 VEZF1Q14119 521 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 SPANXN4Q5MJ08 99 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 LRRC74BQ6ZQY2 392 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 ATG4DQ86TL0 474 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 ANKRD46Q86W74 232 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 PPP1R36Q96LQ0 422 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 SLC35A5Q9BS91 424 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 REG4Q9BYZ8 158 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 FAIMQ9NVQ4 179 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 NPAP1Q9NZP6 1156 aa10.11□□□□□ -0.79
SCFD1-206ENST00000484733 MARCOQ9UEW3 520 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-206ENST00000484733 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 E9PBE3 544 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 RPS4Y1P22090 263 aaKnown RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 ANXA11P50995 505 aaKnown RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 CASP9P55211 416 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 CHRNEQ04844 493 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 STX3Q13277 289 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 STK11Q15831 433 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 GPAT3Q53EU6 434 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 SPATA19Q7Z5L4 167 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 TRIML2Q8N7C3 387 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 APH1AQ96BI3 265 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 ZG16BQ96DA0 208 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 ARL5BQ96KC2 179 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 MUS81Q96NY9 551 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 MTHFD2LQ9H903 347 aaPredicted RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 AIG1Q9NVV5 245 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 TMEM181Q9P2C4 612 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 MALT1Q9UDY8 824 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 SLC25A15Q9Y619 301 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 AGAP5A6NIR3 686 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 EIF1BO60739 113 aaKnown RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 RAMP1O60894 148 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 IGHV4-39P01824 125 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 PTAFRP25105 342 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 CDKN1AP38936 164 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 IDH2P48735 452 aaKnown RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 POLR2HP52434 150 aaKnown RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 CDH11P55287 796 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 HPCAP84074 193 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 DMTNQ08495 405 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 NRF1Q16656 503 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 AGAP6Q5VW22 663 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 OR7E24Q6IFN5 339 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 KLHL17Q6TDP4 642 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 CNOT9Q92600 299 aaKnown RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 NAA11Q9BSU3 229 aaPredicted RBP10.1□□□□□ -0.79
SCFD1-206ENST00000484733 NUF2Q9BZD4 464 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 AMBRA1Q9C0C7 1298 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 SLC38A1Q9H2H9 487 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 ALG2Q9H553 416 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 PIF1Q9H611 641 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 TAS2R16Q9NYV7 291 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 DCTN4Q9UJW0 460 aa10.1□□□□□ -0.79
SCFD1-206ENST00000484733 TMED7-TICAM2A0A0A6YYA0 188 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 CCDC154A6NI56 674 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 PDLIM1O00151 329 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 ADAM11O75078 769 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 MRPL33O75394 65 aaKnown RBP10.09□□□□□ -0.79
SCFD1-206ENST00000484733 BGNP21810 368 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 NTF4P34130 210 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 RYKP34925 604 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 OR2B6P58173 313 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 SLC35A1P78382 337 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 MPP2Q14168 576 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 GNA13Q14344 377 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 GABRA6Q16445 453 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 GSTA3Q16772 222 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 FAM174BQ3ZCQ3 159 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 C11orf71Q6IPW1 123 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 TMEM108Q6UXF1 575 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 CROCCP2Q86T23 111 aa10.09□□□□□ -0.79
SCFD1-206ENST00000484733 ANKFN1Q8N957 763 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms