RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 NIPAL3Q6P499 406 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 SLC23A3Q6PIS1 610 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 TSSK4Q6SA08 328 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 KIRREL2Q6UWL6 708 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 HSDL2Q6YN16 418 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 DPY19L2P2Q6ZN68 376 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 PRR23CQ6ZRP0 262 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 MEPCEQ7L2J0 689 aaKnown RBP8.84□□□□□ -0.99
UFD1-208ENST00000484101 LAPTM4BQ86VI4 370 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 ATCAYQ86WG3 371 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 PPP1R3BQ86XI6 285 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 EGFL6Q8IUX8 553 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 GPALPP1Q8IXQ4 340 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 CADM2Q8N3J6 435 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 ZNF441Q8N8Z8 693 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 GALNT6Q8NCL4 622 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 ELOA3Q8NG57 546 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 OR6Q1Q8NGQ2 317 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 PFN4Q8NHR9 129 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 HAVCR2Q8TDQ0 301 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 DOK4Q8TEW6 326 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 UFD1Q92890 307 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 TSLPQ969D9 159 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 IFT27Q9BW83 186 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 SEMA4CQ9C0C4 833 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 NXF2Q9GZY0 626 aaKnown RBP8.84□□□□□ -0.99
UFD1-208ENST00000484101 NXF5Q9H1B4 397 aaKnown RBP8.84□□□□□ -0.99
UFD1-208ENST00000484101 SYNDIG1Q9H7V2 258 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 WDR54Q9H977 334 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 CRNNQ9UBG3 495 aaPredicted RBP8.84□□□□□ -0.99
UFD1-208ENST00000484101 TNFRSF10DQ9UBN6 386 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 MKL2Q9ULH7 1088 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 SSR3Q9UNL2 185 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 PCDHGB2Q9Y5G2 931 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 PEX16Q9Y5Y5 336 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 U3KQA8 63 aa8.84□□□□□ -0.99
UFD1-208ENST00000484101 SPTBP11277 2137 aa8.83□□□□□ -1
UFD1-208ENST00000484101 EXPH5Q8NEV8 1989 aa8.83□□□□□ -1
UFD1-208ENST00000484101 IGHV5-10-1A0A0J9YXX1 117 aa8.83□□□□□ -1
UFD1-208ENST00000484101 PNMA8CA0A1B0GUJ8 204 aa8.83□□□□□ -1
UFD1-208ENST00000484101 A8MU76 341 aa8.83□□□□□ -1
UFD1-208ENST00000484101 IMPA2O14732 288 aa8.83□□□□□ -1
UFD1-208ENST00000484101 ARPC3O15145 178 aa8.83□□□□□ -1
UFD1-208ENST00000484101 HYAL3O43820 417 aaPredicted RBP8.83□□□□□ -1
UFD1-208ENST00000484101 TSPAN2O60636 221 aa8.83□□□□□ -1
UFD1-208ENST00000484101 LRP3O75074 770 aa8.83□□□□□ -1
UFD1-208ENST00000484101 CPNE3O75131 537 aaKnown RBP8.83□□□□□ -1
UFD1-208ENST00000484101 OR7A10O76100 309 aa8.83□□□□□ -1
UFD1-208ENST00000484101 HEXBP07686 556 aa8.83□□□□□ -1
UFD1-208ENST00000484101 CD63P08962 238 aa8.83□□□□□ -1
UFD1-208ENST00000484101 ZGLP1P0C6A0 271 aa8.83□□□□□ -1
UFD1-208ENST00000484101 FGF5P12034 268 aa8.83□□□□□ -1
UFD1-208ENST00000484101 PGCP20142 388 aa8.83□□□□□ -1
UFD1-208ENST00000484101 CD40LGP29965 261 aa8.83□□□□□ -1
UFD1-208ENST00000484101 GABRA5P31644 462 aa8.83□□□□□ -1
UFD1-208ENST00000484101 S100A5P33763 92 aa8.83□□□□□ -1
UFD1-208ENST00000484101 ATP6V1E1P36543 226 aa8.83□□□□□ -1
UFD1-208ENST00000484101 SLC1A3P43003 542 aa8.83□□□□□ -1
UFD1-208ENST00000484101 GRK6P43250 576 aa8.83□□□□□ -1
UFD1-208ENST00000484101 TMED10P49755 219 aaKnown RBP8.83□□□□□ -1
UFD1-208ENST00000484101 GAS1P54826 345 aa8.83□□□□□ -1
UFD1-208ENST00000484101 SLC26A5P58743 744 aa8.83□□□□□ -1
UFD1-208ENST00000484101 RPS4XP62701 263 aaKnown RBP8.83□□□□□ -1
UFD1-208ENST00000484101 CCL7P80098 99 aa8.83□□□□□ -1
UFD1-208ENST00000484101 LSM11P83369 360 aaKnown RBP eCLIP8.83□□□□□ -1
UFD1-208ENST00000484101 DAB2P98082 770 aa8.83□□□□□ -1
UFD1-208ENST00000484101 CRYZQ08257 329 aaKnown RBP8.83□□□□□ -1
UFD1-208ENST00000484101 IL10RAQ13651 578 aa8.83□□□□□ -1
UFD1-208ENST00000484101 TRAM1Q15629 374 aa8.83□□□□□ -1
UFD1-208ENST00000484101 SLC35D3Q5M8T2 416 aa8.83□□□□□ -1
UFD1-208ENST00000484101 PERM1Q5SV97 790 aa8.83□□□□□ -1
UFD1-208ENST00000484101 C16orf87Q6PH81 154 aa8.83□□□□□ -1
UFD1-208ENST00000484101 COX15Q7KZN9 410 aa8.83□□□□□ -1
UFD1-208ENST00000484101 OVCH1Q7RTY7 1134 aa8.83□□□□□ -1
UFD1-208ENST00000484101 GATAD2AQ86YP4 633 aa8.83□□□□□ -1
UFD1-208ENST00000484101 C9orf40Q8IXQ3 194 aa8.83□□□□□ -1
UFD1-208ENST00000484101 ACBD7Q8N6N7 88 aa8.83□□□□□ -1
UFD1-208ENST00000484101 TMCO5AQ8N6Q1 288 aa8.83□□□□□ -1
UFD1-208ENST00000484101 POMGNT2Q8NAT1 580 aa8.83□□□□□ -1
UFD1-208ENST00000484101 ZSCAN1Q8NBB4 408 aa8.83□□□□□ -1
UFD1-208ENST00000484101 OR5L2Q8NGL0 311 aa8.83□□□□□ -1
UFD1-208ENST00000484101 OR13C2Q8NGS9 318 aa8.83□□□□□ -1
UFD1-208ENST00000484101 OR4C3Q8NH37 302 aa8.83□□□□□ -1
UFD1-208ENST00000484101 MCFD2Q8NI22 146 aa8.83□□□□□ -1
UFD1-208ENST00000484101 IFI44Q8TCB0 444 aa8.83□□□□□ -1
UFD1-208ENST00000484101 STT3BQ8TCJ2 826 aa8.83□□□□□ -1
UFD1-208ENST00000484101 PHOSPHO1Q8TCT1 267 aa8.83□□□□□ -1
UFD1-208ENST00000484101 C3orf49Q96BT1 292 aa8.83□□□□□ -1
UFD1-208ENST00000484101 CLIP3Q96DZ5 547 aa8.83□□□□□ -1
UFD1-208ENST00000484101 SH3YL1Q96HL8 342 aaPredicted RBP8.83□□□□□ -1
UFD1-208ENST00000484101 LOXL4Q96JB6 756 aa8.83□□□□□ -1
UFD1-208ENST00000484101 CCDC74BQ96LY2 380 aa8.83□□□□□ -1
UFD1-208ENST00000484101 OR5M11Q96RB7 305 aa8.83□□□□□ -1
UFD1-208ENST00000484101 OR6C1Q96RD1 312 aa8.83□□□□□ -1
UFD1-208ENST00000484101 GAL3ST4Q96RP7 486 aa8.83□□□□□ -1
UFD1-208ENST00000484101 GFM1Q96RP9 751 aaKnown RBP8.83□□□□□ -1
UFD1-208ENST00000484101 NUDT9Q9BW91 350 aa8.83□□□□□ -1
UFD1-208ENST00000484101 TBL1XR1Q9BZK7 514 aa8.83□□□□□ -1
UFD1-208ENST00000484101 SLIRPQ9GZT3 109 aaKnown RBP8.83□□□□□ -1
UFD1-208ENST00000484101 AKIP1Q9NQ31 210 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms