RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MCCC2Q9HCC0 563 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 COPS7AQ9UBW8 275 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 FBXL4Q9UKA2 621 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CFL2Q9Y281 166 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC35A3Q9Y2D2 325 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 MPDZO75970 2070 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 EFCAB9A8MZ26 197 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 WWP2O00308 870 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 SCDO00767 359 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 SOCS6O14544 535 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ADAM10O14672 748 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TO15178 435 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF264O43296 627 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 LRRTM2O43300 516 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ALOX12BO75342 701 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 LDOC1O95751 146 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 HEXBP07686 556 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CLUP10909 449 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 UBL4AP11441 157 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CSTF2P33240 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 GRK6P43250 576 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 MTNR1AP48039 350 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC9A3P48764 834 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 FOXK2Q01167 660 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF117Q03924 483 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TSTQ16762 297 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CCDC157Q569K6 752 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR2G6Q5TZ20 316 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 PLBD1Q6P4A8 553 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 LNX2Q8N448 690 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 NANOGP1Q8N7R0 232 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR4F15Q8NGB8 312 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 OTULINQ96BN8 352 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 RNFT2Q96EX2 444 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 TAPBPLQ9BX59 468 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 MRPS18AQ9NVS2 196 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 DMXL2Q8TDJ6 3036 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 CEP295Q9C0D2 2601 aa8.08□□□□□ -1.12
CDC42SE1-204ENST00000483763 INHBBP09529 407 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 FGF5P12034 268 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 BMP7P18075 431 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 NOS3P29474 1203 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 RBM34P42696 430 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 CLK1P49759 484 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 CDH11P55287 796 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 RPS3AP61247 264 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 EGR4Q05215 589 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 PLCXD2Q0VAA5 305 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 SPHARQ15513 63 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 PLA2G2CQ5R387 149 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 HLA-DQA1Q5Y7H0 255 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 C19orf48Q6RUI8 117 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 DBX2Q6ZNG2 339 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC29A4Q7RTT9 530 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 IGFN1Q86VF2 1251 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 CDK20Q8IZL9 346 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 TMCO5AQ8N6Q1 288 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF527Q8NB42 609 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 CYB561A3Q8NBI2 242 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR5M3Q8NGP4 307 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 TM9SF4Q92544 642 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 DNAJA3Q96EY1 480 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 CRELD1Q96HD1 420 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF649Q9BS31 505 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 IFT27Q9BW83 186 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 SEMA4CQ9C0C4 833 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 KRCC1Q9NPI7 259 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 DIMT1Q9UNQ2 313 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ERGIC3Q9Y282 383 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 LOC400499M0QZD8 3231 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZZEF1O43149 2961 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 LOC100506127A0A0U1RQW1 187 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 PMS2P1A4D2B8 440 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 C2orf72A6NCS6 295 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 GTPBP1O00178 669 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 IMPA2O14732 288 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC22A1O15245 554 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 HCRTR2O43614 444 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 AIREO43918 545 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 PPP1R3DO95685 299 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ONECUT2O95948 504 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 LIMS3P0CW19 117 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 LIMS4P0CW20 117 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 IL12BP29460 328 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 EMP2P54851 167 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 CLDN6P56747 220 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 COPZ1P61923 177 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 DCAF7P61962 342 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 RSPO4Q2I0M5 234 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF367Q7RTV3 350 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 NANOGNBQ7Z5D8 188 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 ATG4DQ86TL0 474 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 LHFPL3Q86UP9 236 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 C9orf43Q8TAL5 461 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 DYNC2LI1Q8TCX1 351 aa8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 DNAJA4Q8WW22 397 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-204ENST00000483763 TRMT61AQ96FX7 289 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms