RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PMS2P2O95744 297 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 FESP07332 822 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 NUDT7P0C024 238 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 CRYGSP22914 178 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 TACR3P29371 465 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 COPZ1P61923 177 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 POU4F3Q15319 338 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 TESK1Q15569 626 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 PAGE3Q5JUK9 113 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 PAMR1Q6UXH9 720 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 TFAP2EQ6VUC0 442 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 STAC2Q6ZMT1 411 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF550Q7Z398 422 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
HMGN1-213ENST00000482192 ADGRG3Q86Y34 549 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 BBS10Q8TAM1 723 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 MAL2Q969L2 176 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 DDIT4LQ96D03 193 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 PSD2Q9BQI7 771 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 OR11A1Q9GZK7 315 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 LIME1Q9H400 295 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF385DQ9H6B1 395 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF446Q9NWS9 450 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 VAPAQ9P0L0 249 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 C6orf203Q9P0P8 240 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-213ENST00000482192 SLAMF8Q9P0V8 285 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 IFT52Q9Y366 437 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 TMED7Q9Y3B3 224 aa10.58□□□□□ -0.72
HMGN1-213ENST00000482192 ANKHD1Q8IWZ3 2542 aaKnown RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 TRBV5-3A0A0A0MS03 114 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF724A8MTY0 619 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 DEFB108AA8MXU0 73 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ANGPT2O15123 496 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 GKN3PP0CG01 181 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 CCNA2P20248 432 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 PSMB1P20618 241 aaKnown RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 DNASE1P24855 282 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ART1P52961 327 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 IST1P53990 364 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 RASGEF1BQ0VAM2 473 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF311Q5JNZ3 666 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 GCNT6Q5T4J0 391 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 METTL21CQ5VZV1 264 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ANKRD34AQ69YU3 496 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ABLIM2Q6H8Q1 611 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 SPNS3Q6ZMD2 512 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 NUFIP2Q7Z417 695 aaKnown RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 GABRG1Q8N1C3 465 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ZC3HAV1LQ96H79 300 aaKnown RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ARL5BQ96KC2 179 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 SPATA9Q9BWV2 254 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ACTR6Q9GZN1 396 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 OR10A4Q9H209 315 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 PLEKHF2Q9H8W4 249 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 EMC3Q9P0I2 261 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 TMEM181Q9P2C4 612 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 LEF1Q9UJU2 399 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 OSGIN1Q9UJX0 560 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 ING1Q9UK53 422 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-213ENST00000482192 TRAPPC4Q9Y296 219 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 GPR52Q9Y2T5 361 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 NDUFAF1Q9Y375 327 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 CSMD1Q96PZ7 3565 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
HMGN1-213ENST00000482192 CREBBPQ92793 2442 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 IGKV3D-15A0A087WSY6 115 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 EVPLLA8MZ36 301 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 PGM3O95394 542 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 RAF1P04049 648 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 TROVE2P10155 538 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGN1-213ENST00000482192 ETS2P15036 469 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 CD1EP15812 388 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 GPX2P18283 190 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 KLK2P20151 261 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 ACAA2P42765 397 aaKnown RBP10.56□□□□□ -0.72
HMGN1-213ENST00000482192 OR3A2P47893 321 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 SLC35A1P78382 337 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 CDK6Q00534 326 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 KEAP1Q14145 624 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 P2RY6Q15077 328 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 PDK3Q15120 406 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 WBP2NLQ6ICG8 309 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 REEP3Q6NUK4 255 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 GALNT5Q7Z7M9 940 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 CXorf67Q86X51 503 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-213ENST00000482192 KRT73Q86Y46 540 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 CLIP4Q8N3C7 705 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 CADM2Q8N3J6 435 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 NFKBIDQ8NI38 313 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 PIGXQ8TBF5 258 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 TSPEARQ8WU66 669 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 SLC35B4Q969S0 331 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 PIK3IP1Q96FE7 263 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF300Q96RE9 604 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-213ENST00000482192 FOXC2Q99958 501 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms