RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CPLX1O14810 134 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 HCRTR1O43613 425 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 RBMXP38159 391 aaKnown RBP3.9□□□□□ -1.79
SF3B1-210ENST00000482158 TDO2P48775 406 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 GRB7Q14451 532 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 MESDQ14696 234 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 GANABQ14697 944 aaKnown RBP3.9□□□□□ -1.79
SF3B1-210ENST00000482158 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-210ENST00000482158 EOGTQ5NDL2 527 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 BEND3Q5T5X7 828 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 ALLCQ8N6M5 410 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 ARL6IP6Q8N6S5 226 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 CCDC71LQ8N9Z2 235 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 OR2L5Q8NG80 312 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 OR9A1PQ8NGU1 263 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 MRPS31Q92665 395 aaKnown RBP3.9□□□□□ -1.79
SF3B1-210ENST00000482158 IMMP1LQ96LU5 166 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 GAL3ST1Q99999 423 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 LRRN3Q9H3W5 708 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 VCPKMTQ9H867 229 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 PTBP2Q9UKA9 531 aaKnown RBP3.9□□□□□ -1.79
SF3B1-210ENST00000482158 UGT2A1Q9Y4X1 527 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 TIMM10BQ9Y5J6 103 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 ATP10AO60312 1499 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 ARHGAP23Q9P227 1491 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 MEGF6O75095 1541 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 TRDCB7Z8K6 153 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 PANO1I0J062 215 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 EMC8O43402 210 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 MMP23AO75900 390 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 LGI1O95970 557 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF44P15621 663 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 IMPDH1P20839 514 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 PTMSP20962 102 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 FUT3P21217 361 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 GLRA2P23416 452 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 HLCSP50747 726 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 PLK1P53350 603 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 SYT10Q6XYQ8 523 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 CCDC80Q76M96 950 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 ARCQ7LC44 396 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF100Q8IYN0 542 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 OR2AP1Q8NGE2 309 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 RAPGEF5Q92565 580 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 ARHGDIGQ99819 225 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 ZDHHC11Q9H8X9 412 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 APMAPQ9HDC9 416 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 ANAPC11Q9NYG5 84 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 TMCC3Q9ULS5 477 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 PNPLA6Q8IY17 1366 aa3.89□□□□□ -1.79
SF3B1-210ENST00000482158 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 LGALS2P05162 132 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 RBMY1CP0DJD4 496 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 NPR2P20594 1047 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 YWHABP31946 246 aaKnown RBP3.88□□□□□ -1.79
SF3B1-210ENST00000482158 MAP3K8P41279 467 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 GPM6BQ13491 265 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 NSUN5P1Q3KNT7 163 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 C1orf220Q5T0J3 134 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 VRK2Q86Y07 508 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 KRTAP11-1Q8IUC1 163 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 SETD7Q8WTS6 366 aaKnown RBP3.88□□□□□ -1.79
SF3B1-210ENST00000482158 ANKRD49Q8WVL7 239 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 COQ2Q96H96 371 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 NAP1L2Q9ULW6 460 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-210ENST00000482158 IFT52Q9Y366 437 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 SLCO1B1Q9Y6L6 691 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 DDX49Q9Y6V7 483 aaKnown RBP3.88□□□□□ -1.79
SF3B1-210ENST00000482158 TTC21BQ7Z4L5 1316 aa3.88□□□□□ -1.79
SF3B1-210ENST00000482158 PSMB11A5LHX3 300 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 F5H6K3 240 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 DCTN6O00399 190 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 PFKFB2O60825 505 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 N4BP1O75113 896 aaKnown RBP3.87□□□□□ -1.79
SF3B1-210ENST00000482158 RHOBTB1O94844 696 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 ACTL6AO96019 429 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 IGLV1-47P01700 117 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 CAPN1P07384 714 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 COX5AP20674 150 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 GCAP28676 217 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 CAV2P51636 162 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 EFNB2P52799 333 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 GBX2P52951 348 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-210ENST00000482158 APOC4P55056 127 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 KLRC3Q07444 240 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 CHIT1Q13231 466 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 OR2G6Q5TZ20 316 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 NLRP9Q7RTR0 991 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 TBC1D21Q8IYX1 336 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 C6orf223Q8N319 242 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 ST8SIA1Q92185 356 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 EBF4Q9BQW3 602 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 SH2D2AQ9NP31 389 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 KIF25Q9UIL4 384 aa3.87□□□□□ -1.79
SF3B1-210ENST00000482158 COL16A1Q07092 1604 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-210ENST00000482158 TRAV26-1A0A087WT03 109 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 TMEM110-MUSTN1A8MSY1 372 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 IDSB3KWA1 339 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 GPR89AB7ZAQ6 455 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 PRKAB2O43741 272 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms