RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RABEP2Q9H5N1 569 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 EVA1AQ9H8M9 152 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 TMEM181Q9P2C4 612 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 SLC9A8Q9Y2E8 581 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 RNF115Q9Y4L5 304 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 MAGED1Q9Y5V3 778 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 HIVEP1P15822 2718 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 DSPPQ9NZW4 1301 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 A0A0G2JPF8 293 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 GOLGA8QA0A0J9YX86 632 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 GOLGA8OA6NCC3 632 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 OR6C65A6NJZ3 312 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 HNRNPCL2B2RXH8 293 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 HNRNPCL3B7ZW38 293 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 GOLGA8NF8WBI6 632 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 HS3ST1O14792 307 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 OIP5O43482 229 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 DIAPH2O60879 1101 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 MRPL33O75394 65 aaKnown RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 VAMP5O95183 116 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 CD3EP07766 207 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 GGT1P19440 569 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 RPS4Y1P22090 263 aaKnown RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 ADSLP30566 484 aaPredicted RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 RYKP34925 604 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 CRATP43155 626 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 IDH2P48735 452 aaKnown RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 NME5P56597 212 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 DSTNP60981 165 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 CHRNEQ04844 493 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 FUT5Q11128 374 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 MAPK14Q16539 360 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 NDUFAF6Q330K2 333 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 Q5PR19 223 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 C6orf10Q5SRN2 563 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 FBXW9Q5XUX1 488 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 KLHL17Q6TDP4 642 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 C5orf46Q6UWT4 87 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 BHLHA15Q7RTS1 189 aaPredicted RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 WFDC8Q8IUA0 241 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 CLEC4FQ8N1N0 589 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 C17orf78Q8N4C9 275 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 BHLHE22Q8NFJ8 381 aaPredicted RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 STON2Q8WXE9 905 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 FBXW5Q969U6 566 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 TRMT61AQ96FX7 289 aaKnown RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 PLPPR2Q96GM1 343 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 NPAS1Q99742 590 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 TMEM204Q9BSN7 226 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 SPATA5L1Q9BVQ7 753 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 SLC38A1Q9H2H9 487 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 WDR55Q9H6Y2 383 aaPredicted RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 TPT1P8Q9HAU6 139 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 TCF7L2Q9NQB0 619 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 ASB6Q9NWX5 421 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 KCNE5Q9UJ90 142 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 MGAT4BQ9UQ53 548 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 NOSIPQ9Y314 301 aaKnown RBP10.17□□□□□ -0.78
CCM2-213ENST00000480658 USH1CQ9Y6N9 552 aa10.17□□□□□ -0.78
CCM2-213ENST00000480658 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 C5orf58C9J3I9 102 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 EFNA2O43921 213 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 ADAP00813 363 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 GPIP06744 558 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 COX5AP20674 150 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 CXCR1P25024 350 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 SHC1P29353 583 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 RPS4XP62701 263 aaKnown RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 CAPRIN1Q14444 709 aaKnown RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 PPA1Q15181 289 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 SYPL1Q16563 259 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 MRPL2Q5T653 305 aaKnown RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 WBP2NLQ6ICG8 309 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 PAQR6Q6TCH4 344 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 TMEM108Q6UXF1 575 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 DNAJC14Q6Y2X3 702 aaPredicted RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 KRT73Q86Y46 540 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 DEPDC4Q8N2C3 294 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 UBE2J2Q8N2K1 259 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 BBS10Q8TAM1 723 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 NUDT8Q8WV74 236 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 ZNF75CPQ92670 426 aaPredicted RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 ATP6V1G3Q96LB4 118 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 TEX37Q96LM6 180 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 CCDC28BQ9BUN5 200 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 SF3B5Q9BWJ5 86 aaKnown RBP10.16□□□□□ -0.78
CCM2-213ENST00000480658 DLL4Q9NR61 685 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 CTPS2Q9NRF8 586 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 TAS2R16Q9NYV7 291 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
CCM2-213ENST00000480658 HRNRQ86YZ3 2850 aaPredicted RBP10.15□□□□□ -0.78
CCM2-213ENST00000480658 TMED7-TICAM2A0A0A6YYA0 188 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
CCM2-213ENST00000480658 SIAH2O43255 324 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 KLF4O43474 513 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 BCHEP06276 602 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms