RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ANGPT4	Q9Y264	503 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	GXYLT2	A0PJZ3	443 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	TNFRSF21	O75509	655 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	CBR3	O75828	277 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	UTS2	O95399	124 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	IFNA14	P01570	189 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	TFPT	P0C1Z6	253 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	ETFA	P13804	333 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	TBXA2R	P21731	343 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	ACVR1B	P36896	505 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	KIR2DL2	P43627	348 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	ATP12A	P54707	1039 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	EEFSEC	P57772	596 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	MTPN	P58546	118 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	PSME3	P61289	254 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	CDK6	Q00534	326 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	COX20	Q5RI15	118 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	AAGAB	Q6PD74	315 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	FIGNL1	Q6PIW4	674 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	P4HA3	Q7Z4N8	544 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	PEX5L	Q8IYB4	626 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	PRR22	Q8IZ63	422 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	PGAM4	Q8N0Y7	254 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR4N2	Q8NGD1	307 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	BBS10	Q8TAM1	723 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	RAB8B	Q92930	207 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	HGD	Q93099	445 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	EFHD2	Q96C19	240 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	REXO5	Q96IC2	774 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	KCNK17	Q96T54	332 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZNF350	Q9GZX5	532 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	BCL2L10	Q9HD36	194 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894	KLRF1	Q9NZS2	232 aa		13.92	□□□□□ -0.18
HDLBP-238	ENST00000479894		A0A1W2PQD3	144 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	PRORSD1P	A6NEY8	169 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	PRAMEF25	A6NGN4	478 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	FXYD1	O00168	92 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	UGT2B11	O75310	529 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	PLAU	P00749	431 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	CGA	P01215	116 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	DBI	P07108	87 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	THBD	P07204	575 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	ETS2	P15036	469 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZNF708	P17019	499 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	CLDN18	P56856	261 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	GABPB1	Q06547	395 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	DNAL1	Q4LDG9	190 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	SAMD4B	Q5PRF9	694 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	NET1	Q7Z628	596 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	PATL1	Q86TB9	770 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	IFNE	Q86WN2	208 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	CMIP	Q8IY22	773 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZNF619	Q8N2I2	560 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	HIPK4	Q8NE63	616 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR10A6	Q8NH74	314 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR14L1P	Q8NHC6	308 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	SLC38A5	Q8WUX1	472 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	RASSF5	Q8WWW0	418 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZNF845	Q96IR2	970 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	SAP130	Q9H0E3	1048 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	SERHL2	Q9H4I8	314 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	EVA1A	Q9H8M9	152 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	IFT52	Q9Y366	437 aa		13.91	□□□□□ -0.18
HDLBP-238	ENST00000479894	CAD	P27708	2225 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	ALG1L2	C9J202	215 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	NME6	O75414	186 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	H6PD	O95479	791 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	ARAF	P10398	606 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	EVI2B	P34910	448 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	CASP9	P55211	416 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	C17orf67	Q0P5P2	114 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	SCARB2	Q14108	478 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	LARS2	Q15031	903 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	BCL2A1	Q16548	175 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	CCDC121	Q6ZUS5	278 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR2T12	Q8NG77	320 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	POP5	Q969H6	163 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	GTPBP3	Q969Y2	492 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	PLPPR2	Q96GM1	343 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	OSBPL11	Q9BXB4	747 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	PLA2G12A	Q9BZM1	189 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	SHARPIN	Q9H0F6	387 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	BARX1	Q9HBU1	254 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	ADA2	Q9NZK5	511 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	PRPF19	Q9UMS4	504 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	DTNA	Q9Y4J8	743 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	MEGF8	Q7Z7M0	2845 aa		13.9	□□□□□ -0.18
HDLBP-238	ENST00000479894	SVEP1	Q4LDE5	3571 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC22A20	A6NK97	555 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	FAM220BP	B1ANY3	271 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	GSTA4	O15217	222 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	GYG2	O15488	501 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	NDUFB5	O43674	189 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	KIAA0513	O60268	411 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	FADS1	O60427	444 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	ADAM11	O75078	769 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	UBOX5	O94941	541 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms