RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PNPLA3Q9NST1 481 aa10.18□□□□□ -0.78
APTX-223ENST00000479656 SACM1LQ9NTJ5 587 aa10.18□□□□□ -0.78
APTX-223ENST00000479656 MED17Q9NVC6 651 aa10.18□□□□□ -0.78
APTX-223ENST00000479656 ABI3Q9P2A4 366 aa10.18□□□□□ -0.78
APTX-223ENST00000479656 TMEM5Q9Y2B1 443 aa10.18□□□□□ -0.78
APTX-223ENST00000479656 DCHS1Q96JQ0 3298 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TMED7-TICAM2A0A0A6YYA0 188 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 MAGEA13PA6NCF6 341 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ZNF891A8MT65 544 aaPredicted RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 SHISA8B8ZZ34 492 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 SNX4O95219 450 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CH25HO95992 272 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TCEA1P23193 301 aaKnown RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 GIPRP48546 466 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 MASP1P48740 699 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 DNASE1L1P49184 302 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ZNF41P51814 821 aaPredicted RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 SOX8P57073 446 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CDC20Q12834 499 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 GINS1Q14691 196 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CTU2Q2VPK5 515 aaKnown RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 DEFB109BQ30KR1 87 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 AGAP7PQ5VUJ5 663 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ZNF786Q8N393 782 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 IQCF1Q8N6M8 205 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 LRRC17Q8N6Y2 441 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 SETD9Q8NE22 299 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 OR8D4Q8NGM9 314 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 OR1J4Q8NGS1 313 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 OR13C2Q8NGS9 318 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 OR51A7Q8NH64 312 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 FAM81AQ8TBF8 368 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ST8SIA1Q92185 356 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 RELTQ969Z4 430 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 SGTBQ96EQ0 304 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 DNAJA3Q96EY1 480 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 AGAP4Q96P64 663 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 SIGLEC12Q96PQ1 595 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TMEM43Q9BTV4 400 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 PTGES2Q9H7Z7 377 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 RASSF1Q9NS23 344 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 GPR83Q9NYM4 423 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 IL20Q9NYY1 176 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 IL20RAQ9UHF4 553 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 POLHQ9Y253 713 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TMED7Q9Y3B3 224 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 MSRB2Q9Y3D2 182 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 A0A0G2JMM0 328 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 A0A1W2PPB8 328 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 A0A1W2PRS3 328 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TMEM72A0PK05 275 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ZC3H12DA2A288 527 aaKnown RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 VGLL3A8MV65 326 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 KIR3DP1A8MWS1 328 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 SUSD5O60279 629 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 PTP4A3O75365 173 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 NEURL1O76050 574 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CASRP41180 1078 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 RPS6KA3P51812 740 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 GPR85P60893 370 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 FOXK1P85037 733 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CDK5Q00535 292 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 LTBQ06643 244 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 FOXF1Q12946 379 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CDK5R2Q13319 367 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CLEC12AQ5QGZ9 265 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 C1QL3Q5VWW1 255 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ACSM5Q6NUN0 579 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 OAFQ86UD1 273 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ENTHD1Q8IYW4 607 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ZNF248Q8NDW4 579 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 CNIH3Q8TBE1 160 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TEX47Q8TBZ9 253 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 KTI12Q96EK9 354 aaPredicted RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 SAMD8Q96LT4 415 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TNFRSF13CQ96RJ3 184 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 TSSK6Q9BXA6 273 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 SLC19A3Q9BZV2 496 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ENKD1Q9H0I2 346 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 ZNF552Q9H707 407 aaPredicted RBP10.17□□□□□ -0.78
APTX-223ENST00000479656 HHATLQ9HCP6 504 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 DEPPQ9NTK1 212 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 RNF6Q9Y252 685 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 HSPE1-MOB4S4R3N1 261 aa10.17□□□□□ -0.78
APTX-223ENST00000479656 MED13Q9UHV7 2174 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 TRAV27A0A087WT01 109 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 M0R129 80 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 SNPHO15079 494 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 TRIM3O75382 744 aaPredicted RBP10.16□□□□□ -0.78
APTX-223ENST00000479656 SLC25A12O75746 678 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 SMNDC1O75940 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
APTX-223ENST00000479656 CNR1P21554 472 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 APOBEC1P41238 236 aaKnown RBP10.16□□□□□ -0.78
APTX-223ENST00000479656 HTR3AP46098 478 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 RPS5P46782 204 aaKnown RBP10.16□□□□□ -0.78
APTX-223ENST00000479656 FXYD6P3P58550 94 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 OR1C1Q15619 314 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 PLPPR5Q32ZL2 321 aa10.16□□□□□ -0.78
APTX-223ENST00000479656 CRTC2Q53ET0 693 aaPredicted RBP10.16□□□□□ -0.78
APTX-223ENST00000479656 C6orf141Q5SZD1 244 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms