RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 CADM2Q8N3J6 435 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 OR2V1Q8NHB1 315 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 MBD3L2Q8NHZ7 208 aaPredicted RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 FIG4Q92562 907 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 ZNF559Q9BR84 538 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 TRIM2Q9C040 744 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 CHST11Q9NPF2 352 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 TMED7-TICAM2A0A0A6YYA0 188 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 KDM4EB2RXH2 506 aaPredicted RBP24.05■■□□□ 1.44
CCM2-211ENST00000478582 TPST2O60704 377 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 FMO6PO60774 539 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 CLDN14O95500 239 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 OPN1LWP04000 364 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 GRNP28799 593 aaKnown RBP24.05■■□□□ 1.44
CCM2-211ENST00000478582 SFTPDP35247 375 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 CLK1P49759 484 aaKnown RBP24.05■■□□□ 1.44
CCM2-211ENST00000478582 SELENOWP63302 87 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 RIPPLY2Q5TAB7 128 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 RNF148Q8N7C7 305 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 RND1Q92730 232 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 PROX1Q92786 737 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 WNT2BQ93097 391 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 TAS2R1Q9NYW7 299 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 TMED7Q9Y3B3 224 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 ZNF175Q9Y473 711 aa24.05■■□□□ 1.44
CCM2-211ENST00000478582 ZNF208O43345 1280 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 HNRNPRO43390 633 aaKnown RBP24.04■■□□□ 1.44
CCM2-211ENST00000478582 HTR2AP28223 471 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 CEACAM8P31997 349 aaPredicted RBP24.04■■□□□ 1.44
CCM2-211ENST00000478582 CDSNQ15517 529 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 POMZP3Q6PJE2 187 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 RANBP3LQ86VV4 465 aaPredicted RBP24.04■■□□□ 1.44
CCM2-211ENST00000478582 ATP6V1C2Q8NEY4 427 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 OR52E4Q8NGH9 312 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 OR10D3Q8NH80 312 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 C3orf49Q96BT1 292 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 C12orf10Q9HB07 376 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 COQ3Q9NZJ6 369 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 PACSIN3Q9UKS6 424 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 SLC9A8Q9Y2E8 581 aa24.04■■□□□ 1.44
CCM2-211ENST00000478582 M0R3H8 397 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 TNFSF11O14788 317 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 TOXO94900 526 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 CEACAM7Q14002 265 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 NPTX1Q15818 432 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 SYT14P1Q58G82 188 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 HBMQ6B0K9 141 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 GLYATQ6IB77 296 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 CBLL1Q75N03 491 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 ATG4DQ86TL0 474 aaPredicted RBP24.03■■□□□ 1.44
CCM2-211ENST00000478582 OR4D11Q8NGI4 311 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 OR6T1Q8NGN1 323 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 OSTF1Q92882 214 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 SDCCAG3Q96C92 435 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 ZNF845Q96IR2 970 aaPredicted RBP24.03■■□□□ 1.44
CCM2-211ENST00000478582 TM9SF2Q99805 663 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 COQ10BQ9H8M1 238 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 ADPRHL2Q9NX46 363 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 EGFL7Q9UHF1 273 aa24.03■■□□□ 1.44
CCM2-211ENST00000478582 PHF3Q92576 2039 aaKnown RBP24.03■■□□□ 1.44
CCM2-211ENST00000478582 TMEM72A0PK05 275 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 CXCR1P25024 350 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 EIF1AXP47813 144 aaKnown RBP24.02■■□□□ 1.44
CCM2-211ENST00000478582 CARD18P57730 90 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 NCALDP61601 193 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 OR1Q1Q15612 314 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 SGCBQ16585 318 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 C6orf89Q6UWU4 347 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 FAM156AQ8NDB6 213 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 DNAJA4Q8WW22 397 aaPredicted RBP24.02■■□□□ 1.44
CCM2-211ENST00000478582 LZICQ8WZA0 190 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 MCHR1Q99705 422 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 PRR14Q9BWN1 585 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 PCDHAC1Q9H158 963 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 GORASP2Q9H8Y8 452 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 TMEM27Q9HBJ8 222 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 TIGARQ9NQ88 270 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 RPS6KB2Q9UBS0 482 aa24.02■■□□□ 1.44
CCM2-211ENST00000478582 PRPF19Q9UMS4 504 aaKnown RBP24.02■■□□□ 1.44
CCM2-211ENST00000478582 A0A1B0GWA3 101 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 CXCL13O43927 109 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 GMNNO75496 209 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 IL2RAP01589 272 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 NCK1P16333 377 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 TCN1P20061 433 aaPredicted RBP24.01■■□□□ 1.43
CCM2-211ENST00000478582 SLC7A1P30825 629 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 BNIP1Q12981 228 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 ULK3Q6PHR2 472 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 FAM162AQ96A26 154 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 MARVELD3Q96A59 401 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 ZFP3Q96NJ6 502 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 MAGEL2Q9UJ55 1249 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 SH3GLB1Q9Y371 365 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 HDGFL3Q9Y3E1 203 aa24.01■■□□□ 1.43
CCM2-211ENST00000478582 A0A0B4J2E0 115 aa24■■□□□ 1.43
CCM2-211ENST00000478582 A0A0G2JNJ9 132 aa24■■□□□ 1.43
CCM2-211ENST00000478582 A0A1B0GX12 115 aa24■■□□□ 1.43
CCM2-211ENST00000478582 SLC22A20A6NK97 555 aa24■■□□□ 1.43
CCM2-211ENST00000478582 HSPB2A8KAH6 182 aa24■■□□□ 1.43
CCM2-211ENST00000478582 RCBTB2O95199 551 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms