RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 LCATP04180 440 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 HSD17B7P56937 341 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 VAMP2P63027 116 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 ADARB1P78563 741 aaKnown RBP13.2□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF704Q6ZNC4 412 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-208ENST00000478423 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 BCDIN3DQ7Z5W3 292 aaKnown RBP13.2□□□□□ -0.3
NPHP4-208ENST00000478423 OR4N4Q8N0Y3 316 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SPERTQ8NA61 448 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF417Q8TAU3 575 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SGCDQ92629 289 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 TEX101Q9BY14 249 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SPNS1Q9H2V7 528 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SERGEFQ9UGK8 458 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 A6NLC8 198 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 CLDN24A6NM45 220 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 HMGN4O00479 90 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 YY2O15391 372 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 CD160O95971 181 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM225BP0DP42 221 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 ANXA3P12429 323 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 HYAL1Q12794 435 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 CHRFAM7AQ494W8 412 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 OR7E24Q6IFN5 339 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 FIP1L1Q6UN15 594 aaKnown RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 ZSCAN4Q8NAM6 433 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 POGLUT1Q8NBL1 392 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 FAM46BQ96A09 425 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 PPIL1Q9Y3C6 166 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 MMACHCQ9Y4U1 282 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 IGLV3-16A0A075B6K0 115 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 TEX46H3BTG2 121 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF749O43361 778 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 FGF17O60258 216 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 VNN2O95498 520 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 IDUAP35475 653 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 SLC1A3P43003 542 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 CEBPGP53567 150 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 SERPINA12Q8IW75 414 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 HAVCR2Q8TDQ0 301 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 NPRL2Q8WTW4 380 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 FAM210AQ96ND0 272 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 WASH6PQ9NQA3 447 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 BRWD3Q6RI45 1802 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 A0A1W2PPC4 97 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 TEAD1P28347 426 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 BSGP35613 385 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 MRGPRX3Q96LB0 322 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 NUDT22Q9BRQ3 303 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 ACTR6Q9GZN1 396 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 FCMRO60667 390 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 MAGEA2P43356 314 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 EEF1A1P68104 462 aaKnown RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 SAXO2Q658L1 398 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 VASNQ6EMK4 673 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 OR5M11Q96RB7 305 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 SDF2Q99470 211 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 CTRCQ99895 268 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 ACER3Q9NUN7 267 aa13.19□□□□□ -0.3
NPHP4-208ENST00000478423 C19orf53Q9UNZ5 99 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-208ENST00000478423 SVILO95425 2214 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 H7C1C5 153 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 LYRM1O43325 122 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 MTRF1O75570 445 aaKnown RBP13.18□□□□□ -0.3
NPHP4-208ENST00000478423 UTS2O95399 124 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 CSNK1A1P48729 337 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 LCN6P62502 163 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 MALLQ13021 153 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 KCNAB1Q14722 419 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM176BQ3YBM2 270 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-208ENST00000478423 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 Q6ZS52 159 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 CLEC1AQ8NC01 280 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-208ENST00000478423 ITFG2Q969R8 447 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF578Q96N58 590 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-208ENST00000478423 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 CPNE5Q9HCH3 593 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 PRDM9Q9NQV7 894 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 INPP5EQ9NRR6 644 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 C2CD4DB7Z1M9 353 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 UPK1BO75841 260 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 OR8G3PP0DMU2 310 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 DNASE1P24855 282 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 TNFSF8P32971 234 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 PRSS3P35030 304 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 ISL1P61371 349 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 GPLD1P80108 840 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 EIF5AL1Q6IS14 154 aaKnown RBP13.18□□□□□ -0.3
NPHP4-208ENST00000478423 NKAIN4Q8IVV8 208 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 UBQLN3Q9H347 655 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms