RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 ZADH2Q8N4Q0 377 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 GNPDA2Q8TDQ7 276 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 DTNBP1Q96EV8 351 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 SCMH1Q96GD3 660 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 FAM46AQ96IP4 442 aaKnown RBP12.08□□□□□ -0.48
LMNA-214ENST00000478063 MRGPRX4Q96LA9 322 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 ZNF184Q99676 751 aaPredicted RBP12.08□□□□□ -0.48
LMNA-214ENST00000478063 NPAS1Q99742 590 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 NIPSNAP1Q9BPW8 284 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 ZNF426Q9BUY5 554 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 SMPD3Q9NY59 655 aaPredicted RBP12.08□□□□□ -0.48
LMNA-214ENST00000478063 B4GALT7Q9UBV7 327 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 TMEFF2Q9UIK5 374 aaPredicted RBP12.08□□□□□ -0.48
LMNA-214ENST00000478063 TMEM5Q9Y2B1 443 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 POFUT2Q9Y2G5 429 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 TMED7Q9Y3B3 224 aa12.08□□□□□ -0.48
LMNA-214ENST00000478063 DNAJC13O75165 2243 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 TRAV17A0A0B4J275 112 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 TMEM72A0PK05 275 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 C7orf72A4D263 438 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 H0YJX3 145 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 SUSD5O60279 629 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 MITFO75030 526 aaPredicted RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 WISP1O95388 367 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 ADAP00813 363 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 RFPL3SP0C7P2 107 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 CDH2P19022 906 aaPredicted RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 APOBEC1P41238 236 aaKnown RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 RAD23AP54725 363 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 PRKCDQ05655 676 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 CRYZQ08257 329 aaKnown RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 FOXO1Q12778 655 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 ZIK1Q3SY52 487 aaPredicted RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 SLC25A53Q5H9E4 307 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 C1orf94Q6P1W5 598 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 CDK20Q8IZL9 346 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 OR5M1Q8NGP8 315 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 POC1BQ8TC44 478 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 DNAJC9Q8WXX5 260 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 SLC39A7Q92504 469 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 EXTL1Q92935 676 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 ZBTB8AQ96BR9 441 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 TMEM43Q9BTV4 400 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 DGCR6LQ9BY27 220 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 UCK2Q9BZX2 261 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 MEPEQ9NQ76 525 aaPredicted RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 PAPOLBQ9NRJ5 636 aaKnown RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 C20orf141Q9NUB4 165 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 RPH3AQ9Y2J0 694 aaPredicted RBP12.07□□□□□ -0.48
LMNA-214ENST00000478063 PCDHGB6Q9Y5F9 930 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
LMNA-214ENST00000478063 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 FAM166BA8MTA8 275 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 ETV2O00321 342 aaPredicted RBP12.06□□□□□ -0.48
LMNA-214ENST00000478063 SNAP29O95721 258 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 SRD5A2P31213 254 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
LMNA-214ENST00000478063 OMPP47874 163 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 HSPA13P48723 471 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 CD97P48960 835 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 DLX5P56178 289 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 FOXK1P85037 733 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 RFX4Q33E94 735 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 RAET1LQ5VY80 246 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.06□□□□□ -0.48
LMNA-214ENST00000478063 ADGRG3Q86Y34 549 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 FAM98AQ8NCA5 519 aaKnown RBP12.06□□□□□ -0.48
LMNA-214ENST00000478063 ATP6V1C2Q8NEY4 427 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 OR14L1PQ8NHC6 308 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 BPIFA2Q96DR5 249 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 TTTY12Q9BZ98 90 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 SLC19A3Q9BZV2 496 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 TOR3AQ9H497 397 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 RIBC2Q9H4K1 309 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 ZNF703Q9H7S9 590 aaPredicted RBP12.06□□□□□ -0.48
LMNA-214ENST00000478063 SERINC1Q9NRX5 453 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 CHRNA9Q9UGM1 479 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 ZFHX4Q86UP3 3567 aa12.06□□□□□ -0.48
LMNA-214ENST00000478063 A8MVM7 634 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 ACOT7O00154 380 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 DLGAP1O14490 977 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 ZIC3O60481 467 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 TRAPPC6AO75865 159 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 SAGP10523 405 aaPredicted RBP12.05□□□□□ -0.48
LMNA-214ENST00000478063 TFPIP10646 304 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 ZNF17P17021 662 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 MAKP20794 623 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 GSTM3P21266 225 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 GSSP48637 474 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 CTBP2P56545 445 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 TSPAN31Q12999 210 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.05□□□□□ -0.488e-32■■□□□ 14.2
LMNA-214ENST00000478063 C3orf33Q6P1S2 294 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 KLHL17Q6TDP4 642 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 IGFL3Q6UXB1 125 aa12.05□□□□□ -0.48
LMNA-214ENST00000478063 YRDCQ86U90 279 aaKnown RBP12.05□□□□□ -0.48
LMNA-214ENST00000478063 GTPBP8Q8N3Z3 284 aaPredicted RBP12.05□□□□□ -0.48
LMNA-214ENST00000478063 C10orf53Q8N6V4 93 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms