RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ZNF208O43345 1280 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 CHP2O43745 196 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SLC19A2O60779 497 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 NPIPB7O75200 414 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 YAP1P46937 504 aaKnown RBP17.95■□□□□ 0.46
ACTB-210ENST00000477812 MAP2K6P52564 334 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 C19orf57Q0VDD7 668 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 IGFBP7Q16270 282 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SYT14P1Q58G82 188 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 LINC00114Q6XXX2 140 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 PIWIL3Q7Z3Z3 882 aaKnown RBP17.95■□□□□ 0.46
ACTB-210ENST00000477812 GDF7Q7Z4P5 450 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 ZNF605Q86T29 641 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SPATA24Q86W54 205 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 OFCC1Q8IZS5 231 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SLC25A43Q8WUT9 341 aaPredicted RBP17.95■□□□□ 0.46
ACTB-210ENST00000477812 CANT1Q8WVQ1 401 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SLC41A3Q96GZ6 507 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 DHRS1Q96LJ7 313 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SEPHS2Q99611 448 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 PRSS27Q9BQR3 290 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 SERINC1Q9NRX5 453 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 PNPLA3Q9NST1 481 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 RPS6KB2Q9UBS0 482 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 RIMS3Q9UJD0 308 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 GTF3C1Q12789 2109 aa17.95■□□□□ 0.46
ACTB-210ENST00000477812 ZC3H12DA2A288 527 aaKnown RBP17.94■□□□□ 0.46
ACTB-210ENST00000477812 ERICH4A6NGS2 130 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 CIB2O75838 187 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 OPN1LWP04000 364 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 GPIP06744 558 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 THRBP10828 461 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 PNMTP11086 282 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 UMPSP11172 480 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 ERFP50548 548 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 TAS2R41P59536 307 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 EGR4Q05215 589 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 MRPL49Q13405 166 aaKnown RBP17.94■□□□□ 0.46
ACTB-210ENST00000477812 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.94■□□□□ 0.468e-18■□□□□ 9.2
ACTB-210ENST00000477812 FAM98BQ52LJ0 330 aaKnown RBP17.94■□□□□ 0.46
ACTB-210ENST00000477812 SMPDL3BQ92485 455 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 SLCO4A1Q96BD0 722 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 KLHL15Q96M94 604 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 RAB3IPQ96QF0 476 aaPredicted RBP17.94■□□□□ 0.46
ACTB-210ENST00000477812 OR11A1Q9GZK7 315 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 COQ10BQ9H8M1 238 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 SLC7A7Q9UM01 511 aa17.94■□□□□ 0.46
ACTB-210ENST00000477812 A0A0J9YW62 118 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 MT-ND1P03886 318 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 FABP3P05413 133 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 RAP2AP10114 183 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 ABOP16442 354 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 RHCEP18577 417 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 CCNA2P20248 432 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 CXCR1P25024 350 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 SFTPDP35247 375 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 ACTR3P61158 418 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 GXYLT1Q4G148 440 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 WLSQ5T9L3 541 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 ESPNLQ6ZVH7 1005 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 ADGRE4PQ86SQ3 457 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 ZDHHC21Q8IVQ6 265 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 PM20D2Q8IYS1 436 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 UBQLNLQ8IYU4 475 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 PAPD5Q8NDF8 572 aaKnown RBP17.93■□□□□ 0.46
ACTB-210ENST00000477812 PIK3C3Q8NEB9 887 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 OR5M9Q8NGP3 310 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 ARL5BQ96KC2 179 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 PIP5K1AQ99755 562 aa17.93■□□□□ 0.46
ACTB-210ENST00000477812 SPIN1Q9Y657 262 aaPredicted RBP17.93■□□□□ 0.46
ACTB-210ENST00000477812 ELOA3DA6NLF2 546 aaPredicted RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 GJE1A6NN92 205 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 SEC14L5O43304 696 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 RRP9O43818 475 aaKnown RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 DIRAS1O95057 198 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 ITGA2P17301 1181 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 FKBP2P26885 142 aaKnown RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 CLK1P49759 484 aaKnown RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 CHRNB3Q05901 458 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 RBPJQ06330 500 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 KPNB1Q14974 876 aaKnown RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 ELOA3BQ3SY89 546 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 TMEM176BQ3YBM2 270 aaPredicted RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 CD163Q86VB7 1156 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 DOLPP1Q86YN1 238 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 ATP6V1C2Q8NEY4 427 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 ELOA3Q8NG57 546 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 STK35Q8TDR2 534 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 DUS3LQ96G46 650 aaKnown RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 MPP4Q96JB8 637 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 TMEM43Q9BTV4 400 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 DENND2DQ9H6A0 471 aaPredicted RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 NMNAT1Q9HAN9 279 aaPredicted RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 CCM2LQ9NUG4 571 aaPredicted RBP17.92■□□□□ 0.46
ACTB-210ENST00000477812 RHCGQ9UBD6 479 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 STOML1Q9UBI4 398 aa17.92■□□□□ 0.46
ACTB-210ENST00000477812 RELNP78509 3460 aa17.91■□□□□ 0.46
ACTB-210ENST00000477812 A8MVM7 634 aa17.91■□□□□ 0.46
ACTB-210ENST00000477812 EIF1AYO14602 144 aaKnown RBP17.91■□□□□ 0.46
ACTB-210ENST00000477812 FZD7O75084 574 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms