RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OR6V1Q8N148 313 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NKAPQ8N5F7 415 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PNPLA1Q8N8W4 532 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OR6K2Q8NGY2 324 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SMAP2Q8WU79 429 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 LMLNQ96KR4 655 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NAA11Q9BSU3 229 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SUCNR1Q9BXA5 334 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SPHK2Q9NRA0 654 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 PDE4DIPQ5VU43 2346 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 DOCK6Q96HP0 2047 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 YLPM1P49750 1951 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 A0A1W2PN81 502 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OR14I1A6ND48 311 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OR2AT4A6NND4 320 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SCAMP2O15127 329 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 ELK1P19419 428 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 AKT1P31749 480 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 VIPR1P32241 457 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 THBS2P35442 1172 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 CHRNA7P36544 502 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 MRPS10P82664 201 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OCLNQ16625 522 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 DCAF10Q5QP82 559 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NCMAPQ5T1S8 102 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 CDPF1Q6NVV7 123 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 CD200R1LQ6Q8B3 271 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 TMEM207Q6UWW9 146 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OAFQ86UD1 273 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 IQCHQ86VS3 1027 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 NEK7Q8TDX7 302 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 TFGQ92734 400 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SMIM14Q96QK8 99 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 DERL2Q9GZP9 239 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 OR52A5Q9H2C5 316 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 SFXN1Q9H9B4 322 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 C2orf42Q9NWW7 574 aa11.75□□□□□ -0.53
RTFDC1-207ENST00000477573 A0A0D9SG52 128 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 SNRPGP15A8MWD9 76 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 EEF1E1O43324 174 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 CHST10O43529 356 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ITGA5P08648 1049 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF888P0CJ79 500 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 PRSS56P0CW18 603 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 TFPIP10646 304 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 NME1P15531 152 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 BMP7P18075 431 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 RAB5AP20339 215 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 THBS4P35443 961 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 IRS1P35568 1242 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 LCP2Q13094 533 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF77Q15935 545 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 LYPLAL1Q5VWZ2 237 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 NSUN5P2Q63ZY6 315 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 PSAPL1Q6NUJ1 521 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 C22orf39Q6P5X5 142 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 PRICKLE2Q7Z3G6 844 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 STAG3L4Q8TBR4 150 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ARL11Q969Q4 196 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 MTERF1Q99551 399 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ACPTQ9BZG2 426 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 GPN1Q9HCN4 374 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 FAM50BQ9Y247 325 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 FNDC3AQ9Y2H6 1198 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 PCDHB1Q9Y5F3 818 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 MYO7AQ13402 2215 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 LNP1A1A4G5 178 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 NCF1BA6NI72 391 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 NCF1CA8MVU1 366 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 B4E171 279 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF821O75541 412 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 CRCPO75575 148 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 SOD1P00441 154 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 F10P00742 488 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ANXA2P07355 339 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 AHRP35869 848 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 CD200P41217 278 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 GZMMP51124 257 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 OR2B8PP59922 312 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 TIAL1Q01085 375 aaKnown RBP eCLIP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ABHD18Q0P651 414 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 TPBGQ13641 420 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 OGFOD3Q6PK18 319 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 RNF165Q6ZSG1 346 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 Q6ZTK2 550 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 PIANPQ8IYJ0 282 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 OR1S2Q8NGQ3 325 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 BBS10Q8TAM1 723 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 KCTD12Q96CX2 325 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 ADAM19Q9H013 955 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms