RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TMEFF2Q9UIK5 374 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 MKLN1Q9UL63 735 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 AMDHD2Q9Y303 409 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 GOLGA8QA0A0J9YX86 632 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SH3PXD2BA1X283 911 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 GOLGA8OA6NCC3 632 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SMIM23A6NLE4 172 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 ZNF716A6NP11 495 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 TMEM114B3SHH9 223 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 GOLGA8NF8WBI6 632 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 G3V2L1 256 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SCAMP2O15127 329 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 URI1O94763 535 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 LAMP1P11279 417 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 BCKDHAP12694 445 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 ZNF23P17027 643 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 MATN1P21941 496 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 PRPH2P23942 346 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 CFPP27918 469 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 MAPK1P28482 360 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 GCAP28676 217 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SERPINF1P36955 418 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 RPL3P39023 403 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 FRKP42685 505 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 CHN2P52757 468 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 PRPS1P60891 318 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 UBE2NP61088 152 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 NAA20P61599 178 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC25A3Q00325 362 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 TGFBR3Q03167 851 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SKP2Q13309 424 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 PDE7AQ13946 482 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 CCNIQ14094 377 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 PTGR1Q14914 329 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 KIAA0040Q15053 153 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 LSM12Q3MHD2 195 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 RFTN2Q52LD8 501 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 HIKESHIQ53FT3 197 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC25A53Q5H9E4 307 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SHQ1Q6PI26 577 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 THSD4Q6ZMP0 1018 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 EIF3MQ7L2H7 374 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 GPAT4Q86UL3 456 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 MEX3DQ86XN8 651 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 RELL1Q8IUW5 271 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 CLEC4FQ8N1N0 589 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 C3orf56Q8N813 242 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 ZNF540Q8NDQ6 660 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC25A43Q8WUT9 341 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 MTERF3Q96E29 417 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 ZNF764Q96H86 408 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 METTL2AQ96IZ6 378 aaKnown RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 ARL5BQ96KC2 179 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC35G5Q96KT7 338 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SOX7Q9BT81 388 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 LAT2Q9GZY6 243 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 RAB1BQ9H0U4 201 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 NARFLQ9H6Q4 476 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 MYOZ1Q9NP98 299 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC7A10Q9NS82 523 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 ATAD3AQ9NVI7 634 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 PSMC3IPQ9P2W1 217 aaPredicted RBP5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 MALT1Q9UDY8 824 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 CHRNA9Q9UGM1 479 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 EMCNQ9ULC0 261 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC9A8Q9Y2E8 581 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 TMED5Q9Y3A6 229 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 CCL27Q9Y4X3 112 aa5.84□□□□□ -1.47
RTFDC1-206ENST00000477485 IGKV3D-15A0A087WSY6 115 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 CENPVL1A0A0U1RR11 272 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 RNF103-CHMP3A0A140T963 221 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 A0A1W2PPM1 405 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TMEM233B4DJY2 109 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PIP5K1BO14986 540 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 ANKRD28O15084 1053 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 LSM1O15116 133 aaKnown RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 FCMRO60667 390 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TBX19O60806 448 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PEX11AO75192 247 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 STX11O75558 287 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PMS2P2O95744 297 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 CRYAAP02489 173 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PROCP04070 461 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 OR4A8P0C604 315 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 DAOP14920 347 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 CPA3P15088 417 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 IFNGR1P15260 489 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 CREB1P16220 341 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 IL2RGP31785 369 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 APOBEC1P41238 236 aaKnown RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 SLC1A3P43003 542 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 ETF1P62495 437 aaKnown RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TUBA1BP68363 451 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TUBA4AP68366 448 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 HPCAP84074 193 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PGS1Q32NB8 556 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 CCDC153Q494R4 210 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 FAM153CQ494X1 144 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms