RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 IRF3Q14653 427 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 SLC36A4Q6YBV0 504 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 RASSF6Q6ZTQ3 369 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 OAFQ86UD1 273 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 SLC51BQ86UW2 128 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 OR2T33Q8NG76 320 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 OR6C4Q8NGE1 309 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 SECISBP2Q96T21 854 aaKnown RBP12.32□□□□□ -0.44
HDAC7-221ENST00000477203 NDC1Q9BTX1 674 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 TMED9Q9BVK6 235 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 MED31Q9Y3C7 131 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 LILRA5A6NI73 299 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 FAM25AB3EWG3 89 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 FAM25CB3EWG5 89 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 FAM25GB3EWG6 89 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 DSCR3O14972 297 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 AKR7A2O43488 359 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 DUX1O43812 170 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 GPR3P46089 330 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 GABRA4P48169 554 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 GRPEL2Q8TAA5 225 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 TM9SF4Q92544 642 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 OSTF1Q92882 214 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 ST6GAL2Q96JF0 529 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 STACQ99469 402 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 TWSG1Q9GZX9 223 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 CNOT2Q9NZN8 540 aaKnown RBP12.32□□□□□ -0.44
HDAC7-221ENST00000477203 ADAM18Q9Y3Q7 739 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 KLK4Q9Y5K2 254 aa12.32□□□□□ -0.44
HDAC7-221ENST00000477203 CNOT1A5YKK6 2376 aaKnown RBP12.32□□□□□ -0.44
HDAC7-221ENST00000477203 SAGE2PA6NJ88 616 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 DVL2O14641 736 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 PRAMEF2O60811 474 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 RAB36O95755 333 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 LALBAP00709 142 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 DEFA1P59665 94 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 DEFA3P59666 94 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 SKP1P63208 163 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 SNTA1Q13424 505 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CD226Q15762 336 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF367Q7RTV3 350 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF595Q8IYB9 648 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CDK20Q8IZL9 346 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 OR10H4Q8NGA5 316 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 OR52L1Q8NGH7 329 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 OR4K13Q8NH42 304 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF559Q9BR84 538 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 TAPBPLQ9BX59 468 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CDCA4Q9BXL8 241 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 HDHD5Q9BXW7 423 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 SURF4O15260 269 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 FPR3P25089 353 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 NR0B1P51843 470 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 C1DQ13901 141 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 APOOLQ6UXV4 268 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 BMP8AQ7Z5Y6 402 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 POGLUT1Q8NBL1 392 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 PTPMT1Q8WUK0 201 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 MND1Q9BWT6 205 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ASPNQ9BXN1 380 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 KLHL1Q9NR64 748 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 DNAJB12Q9NXW2 375 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF346Q9UL40 294 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ISPDA4D126 451 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 PRODHO43272 600 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 PTTG1O95997 202 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 THBS1P07996 1170 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CELP19835 753 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ITPKBP27987 946 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 NUDT1P36639 197 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ARRB1P49407 418 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 RPS25P62851 125 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF181Q2M3W8 571 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ZNF517Q6ZMY9 492 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CXXC5Q7LFL8 322 aaKnown RBP12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CDH24Q86UP0 819 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ATCAYQ86WG3 371 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 SIRT6Q8N6T7 355 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 SDR9C7Q8NEX9 313 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ANGPTL6Q8NI99 470 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CRELD1Q96HD1 420 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 HS6ST2Q96MM7 605 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 CDH10Q9Y6N8 788 aa12.31□□□□□ -0.44
HDAC7-221ENST00000477203 ASPMQ8IZT6 3477 aa12.3□□□□□ -0.44
HDAC7-221ENST00000477203 BLOC1S5-TXNDC5H3BN57 136 aa12.3□□□□□ -0.44
HDAC7-221ENST00000477203 GTPBP1O00178 669 aaKnown RBP12.3□□□□□ -0.44
HDAC7-221ENST00000477203 PSMD9O00233 223 aa12.3□□□□□ -0.44
HDAC7-221ENST00000477203 TIAF1O95411 115 aa12.3□□□□□ -0.44
HDAC7-221ENST00000477203 GRPRP30550 384 aa12.3□□□□□ -0.44
HDAC7-221ENST00000477203 RPS19P39019 145 aaKnown RBP12.3□□□□□ -0.44
HDAC7-221ENST00000477203 ACAA2P42765 397 aaKnown RBP12.3□□□□□ -0.44
HDAC7-221ENST00000477203 TCTE1Q5JU00 501 aa12.3□□□□□ -0.44
HDAC7-221ENST00000477203 PLXDC1Q8IUK5 500 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms