RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SFTPDP35247 375 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 MTNR1BP49286 362 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 TPD52P55327 224 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 CSNK2A1P68400 391 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 MAD2L1Q13257 205 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 CBFBQ13951 182 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF239Q16600 458 aaKnown RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 CTU2Q2VPK5 515 aaKnown RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 NCMAPQ5T1S8 102 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 MFSD12Q6NUT3 480 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF100Q8IYN0 542 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 CIARTQ8N365 385 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 STPG3Q8N7X2 389 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 BANPQ8N9N5 519 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 RNF128Q8TEB7 428 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 ZFP90Q8TF47 636 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 OIT3Q8WWZ8 545 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 S100PBPQ96BU1 408 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 SH3YL1Q96HL8 342 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 ADGRG7Q96K78 797 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 FOXB1Q99853 325 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 ACTRT3Q9BYD9 372 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 PIGUQ9H490 435 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 FLRT3Q9NZU0 649 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 TBK1Q9UHD2 729 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 A0A0J9YW62 118 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 NME6O75414 186 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 PAX7P23759 505 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 LOXP28300 417 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 MAP3K8P41279 467 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 FRKP42685 505 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 SLC6A8P48029 635 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 LIMS1P48059 325 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ATP12AP54707 1039 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 RAC3P60763 192 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 RPL38P63173 70 aaKnown RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 IL13RA1P78552 427 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ROM1Q03395 351 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TNK1Q13470 666 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ARL13AQ5H913 290 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 CDC73Q6P1J9 531 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 BHLHA15Q7RTS1 189 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 DDIASQ8IXT1 998 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TMCO5AQ8N6Q1 288 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 GATSQ8NAP1 163 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 OR4C3Q8NH37 302 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 KIF18AQ8NI77 898 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TSPEARQ8WU66 669 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 SLC25A43Q8WUT9 341 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM158Q8WZ71 300 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 OR5P2Q8WZ92 322 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TSSK3Q96PN8 268 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 REG4Q9BYZ8 158 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 PCDHGB4Q9UN71 923 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 DTNAQ9Y4J8 743 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 GPR45Q9Y5Y3 372 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 HIVEP2P31629 2446 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 HRNRQ86YZ3 2850 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 G3V2L1 256 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 GPR171O14626 319 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ANKRD28O15084 1053 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 CFLARO15519 480 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF264O43296 627 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TRIM13O60858 407 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ADAP00813 363 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 CSF3P09919 207 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ACP2P11117 423 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 PGCP20142 388 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 SERPINB5P36952 375 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 CCT3P49368 545 aaKnown RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 FOXA1P55317 472 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 PPA1Q15181 289 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 DUSP5Q16690 384 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM176BQ3YBM2 270 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 CHRFAM7AQ494W8 412 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF672Q499Z4 452 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 GALNTL6Q49A17 601 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ATP6AP1LQ52LC2 224 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TIMM23BQ5SRD1 257 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 HMBOX1Q6NT76 420 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 C3orf33Q6P1S2 294 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM108Q6UXF1 575 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TFAP2EQ6VUC0 442 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 Q6ZT83 130 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 GALNT5Q7Z7M9 940 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TUSC5Q8IXB3 177 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 KIRREL3Q8IZU9 778 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF614Q8N883 585 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 DTX3Q8N9I9 347 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 EIF1ADQ8N9N8 165 aaKnown RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 SLC16A11Q8NCK7 471 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 SFXN5Q8TD22 340 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 CIDECQ96AQ7 238 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM185BQ9H7F4 350 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 EXD2Q9NVH0 621 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 LPAR3Q9UBY5 353 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 ATP6V1HQ9UI12 483 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 POU2F3Q9UKI9 436 aa6.44□□□□□ -1.38
BRCA1-214ENST00000477152 MAP1AP78559 2803 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms