RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 HIPK4Q8NE63 616 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 OIT3Q8WWZ8 545 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 ADAM19Q9H013 955 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 ARL8BQ9NVJ2 186 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 THUMPD1Q9NXG2 353 aaKnown RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 TMED7Q9Y3B3 224 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 ZNF175Q9Y473 711 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 INTS1Q8N201 2190 aaKnown RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 BBIP1A8MTZ0 92 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 NME4O00746 187 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 DVL2O14641 736 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 ME2P23368 584 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 UQCRC1P31930 480 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 NTF4P34130 210 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 SLC1A3P43003 542 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 DIO1P49895 249 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 RPS3AP61247 264 aaKnown RBP11.1□□□□□ -0.63
APTX-220ENST00000476858 MYBPHQ13203 477 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 LARS2Q15031 903 aaKnown RBP11.1□□□□□ -0.63
APTX-220ENST00000476858 VMACQ2NL98 169 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 SYT14P1Q58G82 188 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 C22orf34Q6ZV56 151 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 CHMP1BQ7LBR1 199 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 SLC15A3Q8IY34 581 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 ZNF610Q8N9Z0 462 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 C11orf65Q8NCR3 313 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 RP9Q8TA86 221 aaKnown RBP11.1□□□□□ -0.63
APTX-220ENST00000476858 RNF128Q8TEB7 428 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 PMM1Q92871 262 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 C3orf49Q96BT1 292 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 DTNBP1Q96EV8 351 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 ZNF300Q96RE9 604 aaPredicted RBP11.1□□□□□ -0.63
APTX-220ENST00000476858 ZNF629Q9UEG4 869 aaPredicted RBP11.1□□□□□ -0.63
APTX-220ENST00000476858 CHRNA9Q9UGM1 479 aa11.1□□□□□ -0.63
APTX-220ENST00000476858 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 TMEM247A6NEH6 219 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 FAAHO00519 579 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 SLC22A2O15244 555 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 CCDC22O60826 627 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 SHOX2O60902 331 aaPredicted RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 SMNDC1O75940 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
APTX-220ENST00000476858 LYPD3O95274 346 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 IL18BPO95998 194 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 THY1P04216 161 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 FESP07332 822 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 TFPIP10646 304 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 ADSLP30566 484 aaPredicted RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 PRKAR1BP31321 381 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 CCKARP32238 428 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 ASCL1P50553 236 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 POLR2HP52434 150 aaKnown RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 EEFSECP57772 596 aaKnown RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 MAPRE2Q15555 327 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 C3orf33Q6P1S2 294 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 ATG4DQ86TL0 474 aaPredicted RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 ARMC8Q8IUR7 673 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 MCEMP1Q8IX19 187 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 TUSC5Q8IXB3 177 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 OR8J3Q8NGG0 315 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 TMEM234Q8WY98 164 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 CCT8L2Q96SF2 557 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 ARHGDIGQ99819 225 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 HHATLQ9HCP6 504 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 GALNT8Q9NY28 637 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 KLHL13Q9P2N7 655 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 ZNF232Q9UNY5 417 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 CORO2BQ9UQ03 480 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 ANGPT4Q9Y264 503 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 IFT52Q9Y366 437 aa11.09□□□□□ -0.63
APTX-220ENST00000476858 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
APTX-220ENST00000476858 IGKV1D-42A0A075B6H8 117 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 A0A1B0GWA3 101 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 A8MXE2 369 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 SYT5O00445 386 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 SS18L1O75177 396 aaPredicted RBP11.08□□□□□ -0.64
APTX-220ENST00000476858 SYNGR4O95473 234 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 COX6B1P14854 86 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 AGTR1P30556 359 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 SLC7A1P30825 629 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 OPRM1P35372 400 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 KCNJ5P48544 419 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 NUDT2P50583 147 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 SLC7A2P52569 658 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 EGR4Q05215 589 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 FAM27E3Q08E93 113 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 RBBP4Q09028 425 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 GNA13Q14344 377 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 SF3B4Q15427 424 aaKnown RBP eCLIP11.08□□□□□ -0.64
APTX-220ENST00000476858 NRF1Q16656 503 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 FBXL19-AS1Q494R0 122 aa11.08□□□□□ -0.64
APTX-220ENST00000476858 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms