RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 OR2G6Q5TZ20 316 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 CEND1Q8N111 149 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 FBXL16Q8N461 479 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 C11orf42Q8N5U0 333 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 TCTEX1D2Q8WW35 142 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 GCOM2Q9BZD3 368 aaPredicted RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 SLITRK2Q9H156 845 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 PRPF19Q9UMS4 504 aaKnown RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 RABL2BQ9UNT1 228 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 VSIG4Q9Y279 399 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 RRP15Q9Y3B9 282 aaKnown RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 IKBKGQ9Y6K9 419 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 RPAP1Q9BWH6 1393 aaPredicted RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 CLSPNQ9HAW4 1339 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 IGHV7-81A0A0B4J1V7 117 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 A0A0G2JRQ6 117 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 ZNF264O43296 627 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 TIMM8AO60220 97 aaPredicted RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 PFKFB2O60825 505 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 AP2A1O95782 977 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 IGHV3-48P01763 117 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 HSPB1P04792 205 aaKnown RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 ZNF853P0CG23 659 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 RNH1P13489 461 aaKnown RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 HOXD10P28358 340 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 OR3A4PP47883 348 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 BIDP55957 195 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 SLC10A7Q0GE19 358 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 PRR30Q53SZ7 412 aaPredicted RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 PPP1R27Q86WC6 154 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 TRIM69Q86WT6 500 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 MTURNQ8N3F0 131 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 ZPLD1Q8TCW7 415 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 CHCHD10Q8WYQ3 142 aaPredicted RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 FAM122AQ96E09 287 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 RBM14Q96PK6 669 aaKnown RBP4.29□□□□□ -1.72
VPS50-212ENST00000476413 POLE4Q9NR33 117 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 PIGLQ9Y2B2 252 aa4.29□□□□□ -1.72
VPS50-212ENST00000476413 IGKV1D-8A0A087WSZ0 117 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 EPOPA6NHQ4 379 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 IDSB3KWA1 339 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 RGS16O15492 202 aaPredicted RBP4.28□□□□□ -1.72
VPS50-212ENST00000476413 TSPAN12O95859 305 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 HSMCR30P0CW71 290 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 HMGB2P26583 209 aaKnown RBP4.28□□□□□ -1.72
VPS50-212ENST00000476413 CRYBB1P53674 252 aaPredicted RBP4.28□□□□□ -1.72
VPS50-212ENST00000476413 ATP1B3P54709 279 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 CHRNB3Q05901 458 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 ISXQ2M1V0 245 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 CARD16Q5EG05 197 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 PHYHD1Q5SRE7 291 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 UQCC3Q6UW78 93 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 DNM1P46Q6ZS02 220 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 CCDC50Q8IVM0 306 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 OR10H4Q8NGA5 316 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 ZNF564Q8TBZ8 553 aaPredicted RBP4.28□□□□□ -1.72
VPS50-212ENST00000476413 FAM110BQ8TC76 370 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 UBE2E3Q969T4 207 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 C10orf35Q96D05 121 aa4.28□□□□□ -1.72
VPS50-212ENST00000476413 RPRD1AQ96P16 312 aaPredicted RBP4.28□□□□□ -1.72
VPS50-212ENST00000476413 ZFP92A6NM28 416 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 HCRTR1O43613 425 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 TBL1XO60907 577 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 ATP5LO75964 103 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 DIO3P55073 304 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 LRRC74AQ0VAA2 488 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 CCDC173Q0VFZ6 552 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 CFAP221Q4G0U5 840 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 BOLA3Q53S33 107 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 KLF17Q5JT82 389 aaPredicted RBP4.27□□□□□ -1.73
VPS50-212ENST00000476413 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 WDR74Q6RFH5 385 aaPredicted RBP4.27□□□□□ -1.73
VPS50-212ENST00000476413 UNQ9370/PRO34162Q6UXP9 181 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 TFAP2EQ6VUC0 442 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 ACOT7LQ6ZUV0 252 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 NRMQ8IXM6 262 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 MAGEE2Q8TD90 523 aaPredicted RBP4.27□□□□□ -1.73
VPS50-212ENST00000476413 HTR3CQ8WXA8 447 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 RAPGEF5Q92565 580 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 NEIL2Q969S2 332 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 TIMD4Q96H15 378 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 PGLYRP4Q96LB8 373 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 COPS8Q99627 209 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 GAL3ST1Q99999 423 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 RAB34Q9BZG1 259 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 ROPN1BQ9BZX4 212 aaPredicted RBP4.27□□□□□ -1.73
VPS50-212ENST00000476413 EHD1Q9H4M9 534 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 SGK2Q9HBY8 427 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 ZNF639Q9UID6 485 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 MMP24Q9Y5R2 645 aa4.27□□□□□ -1.73
VPS50-212ENST00000476413 GFYI3L273 518 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 DCTN6O00399 190 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 STAMBPO95630 424 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 SERPINA3P01011 423 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 TIMP1P01033 207 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 RPS2P15880 293 aaKnown RBP4.26□□□□□ -1.73
VPS50-212ENST00000476413 HTR1FP30939 366 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms