RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 STAC2Q6ZMT1 411 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 MTDHQ86UE4 582 aaKnown RBP12.28□□□□□ -0.44
TMCO1-205ENST00000476143 WFDC8Q8IUA0 241 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 CNOT9Q92600 299 aaKnown RBP12.28□□□□□ -0.44
TMCO1-205ENST00000476143 ZG16BQ96DA0 208 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 SPDL1Q96EA4 605 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 PSD2Q9BQI7 771 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 NAA11Q9BSU3 229 aaPredicted RBP12.28□□□□□ -0.44
TMCO1-205ENST00000476143 LIME1Q9H400 295 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 PLEKHF2Q9H8W4 249 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 UBTD1Q9HAC8 227 aa12.28□□□□□ -0.44
TMCO1-205ENST00000476143 BEX4Q9NWD9 120 aaPredicted RBP12.28□□□□□ -0.44
TMCO1-205ENST00000476143 TMED7-TICAM2A0A0A6YYA0 188 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 PRAMEF27A3QJZ7 478 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 CLDN24A6NM45 220 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 SMAD9O15198 467 aaKnown RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ZNF208O43345 1280 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ATE1O95260 518 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 RPS4Y1P22090 263 aaKnown RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TACR3P29371 465 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ATP4BP51164 291 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 OR2B6P58173 313 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 SLC35A1P78382 337 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 EPS8Q12929 822 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ITGADQ13349 1161 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 RGNQ15493 299 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 RNF220Q5VTB9 566 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 PRAMEF8Q5VWM4 474 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 PRAMEF7Q5VXH5 474 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 SLC2A7Q6PXP3 512 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TFAP2EQ6VUC0 442 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 C20orf204Q6ZNR8 217 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 NUFIP2Q7Z417 695 aaKnown RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 CXorf67Q86X51 503 aaPredicted RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 KRT73Q86Y46 540 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 CADM2Q8N3J6 435 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 BBS10Q8TAM1 723 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 SLC38A5Q8WUX1 472 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 GTF2H4Q92759 462 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 AURKBQ96GD4 344 aaPredicted RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TMEM19Q96HH6 336 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 EBF4Q9BQW3 602 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 SPATA5L1Q9BVQ7 753 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TAPBPLQ9BX59 468 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 CXXC4Q9H2H0 198 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TMEM181Q9P2C4 612 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 SLC13A4Q9UKG4 626 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TRAPPC4Q9Y296 219 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ZNF443Q9Y2A4 671 aaPredicted RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 NOSIPQ9Y314 301 aaKnown RBP12.27□□□□□ -0.45
TMCO1-205ENST00000476143 TMED7Q9Y3B3 224 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 PCDHB14Q9Y5E9 798 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.45
TMCO1-205ENST00000476143 ABCA4P78363 2273 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 CDHR4A6H8M9 788 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 DEFB108AA8MXU0 73 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 ARHGEF9O43307 516 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 CNOT4O95628 575 aaKnown RBP12.26□□□□□ -0.45
TMCO1-205ENST00000476143 ADAP00813 363 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 TFPTP0C1Z6 253 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 CD99P14209 185 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 H2AFXP16104 143 aaPredicted RBP12.26□□□□□ -0.45
TMCO1-205ENST00000476143 OR3A2P47893 321 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 CAPRIN1Q14444 709 aaKnown RBP12.26□□□□□ -0.45
TMCO1-205ENST00000476143 PDK3Q15120 406 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 GTDC1Q4AE62 458 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 AGKQ53H12 422 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 ZNF311Q5JNZ3 666 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 WBP2NLQ6ICG8 309 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 ZNF836Q6ZNA1 936 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 Q6ZT83 130 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 VRK2Q86Y07 508 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 UBE2J2Q8N2K1 259 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 CKAP2Q8WWK9 683 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 HSD17B8Q92506 261 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 APH1AQ96BI3 265 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 CCL19Q99731 98 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 SPATA9Q9BWV2 254 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 POTEKPQ9BYX7 375 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 ESRP2Q9H6T0 727 aaKnown RBP12.26□□□□□ -0.45
TMCO1-205ENST00000476143 A4GALTQ9NPC4 353 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 SLC6A13Q9NSD5 602 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 MRGBPQ9NV56 204 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 RPS6KB2Q9UBS0 482 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 OSGIN1Q9UJX0 560 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 DSPPQ9NZW4 1301 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 AKAP6Q13023 2319 aa12.26□□□□□ -0.45
TMCO1-205ENST00000476143 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
TMCO1-205ENST00000476143 AP3D1O14617 1153 aa12.25□□□□□ -0.45
TMCO1-205ENST00000476143 ANGPT2O15123 496 aa12.25□□□□□ -0.45
TMCO1-205ENST00000476143 SMPD2O60906 423 aa12.25□□□□□ -0.45
TMCO1-205ENST00000476143 BCAS1O75363 584 aaPredicted RBP12.25□□□□□ -0.45
TMCO1-205ENST00000476143 MRPL33O75394 65 aaKnown RBP12.25□□□□□ -0.45
TMCO1-205ENST00000476143 C1QCP02747 245 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms