RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 IKZF5Q9H5V7 419 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 BCL2L10Q9HD36 194 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 KLHL9Q9P2J3 617 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 OSGIN1Q9UJX0 560 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 TMED7Q9Y3B3 224 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 TESMINQ9Y4I5 508 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 DCHS2Q6V1P9 2916 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 SMAD9O15198 467 aaKnown RBP21.41■■□□□ 1.02
CPNE1-223ENST00000475146 PGM3O95394 542 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 ARAFP10398 606 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 KLK2P20151 261 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 SLC1A3P43003 542 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 ARFIP2P53365 341 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 DLEU7Q6UYE1 221 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 ZNF550Q7Z398 422 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 CLIP4Q8N3C7 705 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 CADM2Q8N3J6 435 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 NRGNQ92686 78 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 ZHX1-C8orf76Q96EF9 292 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 ARL5BQ96KC2 179 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 CPPED1Q9BRF8 314 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-223ENST00000475146 MED18Q9BUE0 208 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 GP6Q9HCN6 339 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 KLHL28Q9NXS3 571 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 HDGFL3Q9Y3E1 203 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 GMEB1Q9Y692 573 aa21.41■■□□□ 1.02
CPNE1-223ENST00000475146 FAM221AA4D161 298 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 FKBP2P26885 142 aaKnown RBP21.4■■□□□ 1.02
CPNE1-223ENST00000475146 COPZ1P61923 177 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 CDK6Q00534 326 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 NFYCQ13952 458 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 POU4F3Q15319 338 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 NUFIP2Q7Z417 695 aaKnown RBP21.4■■□□□ 1.02
CPNE1-223ENST00000475146 RETREG3Q86VR2 466 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 TSPEARQ8WU66 669 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 DDIT4LQ96D03 193 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 WFIKKN1Q96NZ8 548 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 TACO1Q9BSH4 297 aaKnown RBP21.4■■□□□ 1.02
CPNE1-223ENST00000475146 FANCFQ9NPI8 374 aa21.4■■□□□ 1.02
CPNE1-223ENST00000475146 TMEM72A0PK05 275 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 CYTIPO60759 359 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 YES1P07947 543 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 ETS2P15036 469 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 GPX2P18283 190 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 ACAA2P42765 397 aaKnown RBP21.39■■□□□ 1.01
CPNE1-223ENST00000475146 CLK1P49759 484 aaKnown RBP21.39■■□□□ 1.01
CPNE1-223ENST00000475146 RASGEF1BQ0VAM2 473 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 SCARB2Q14108 478 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 RUNDC3AQ59EK9 446 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 CGB2Q6NT52 195 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 REEP3Q6NUK4 255 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 BEND4Q6ZU67 534 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 LSRQ86X29 649 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-223ENST00000475146 CDC20BQ86Y33 519 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 KRT73Q86Y46 540 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 DPP10Q8N608 796 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 PSD2Q9BQI7 771 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 CHST2Q9Y4C5 530 aa21.39■■□□□ 1.01
CPNE1-223ENST00000475146 GOSR1O95249 250 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 PMS2P2O95744 297 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 PRG2P13727 222 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 OR2B6P58173 313 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 ANKRD34AQ69YU3 496 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 WBP2NLQ6ICG8 309 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 TFAP2EQ6VUC0 442 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 SERPINA11Q86U17 422 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 ZC3HAV1LQ96H79 300 aaKnown RBP21.38■■□□□ 1.01
CPNE1-223ENST00000475146 CGREF1Q99674 301 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 CCDC134Q9H6E4 229 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 TMEM38AQ9H6F2 299 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 BCO1Q9HAY6 547 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 ZNF226Q9NYT6 803 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 POLQO75417 2590 aa21.38■■□□□ 1.01
CPNE1-223ENST00000475146 LRBAP50851 2863 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 ZNF208O43345 1280 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 FRS3O43559 492 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 SLC6A2P23975 617 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 CXCR1P25024 350 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 MTPNP58546 118 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 CYP51A1Q16850 503 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 MTDHQ86UE4 582 aaKnown RBP21.37■■□□□ 1.01
CPNE1-223ENST00000475146 ANKRD27Q96NW4 1050 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 ZNF300Q96RE9 604 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-223ENST00000475146 SPATA5L1Q9BVQ7 753 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 ADAM19Q9H013 955 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 MRGBPQ9NV56 204 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 TMEM181Q9P2C4 612 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 ANGPT4Q9Y264 503 aa21.37■■□□□ 1.01
CPNE1-223ENST00000475146 AQP1P29972 269 aa21.36■■□□□ 1.01
CPNE1-223ENST00000475146 PRKAR1BP31321 381 aa21.36■■□□□ 1.01
CPNE1-223ENST00000475146 ABLIM2Q6H8Q1 611 aa21.36■■□□□ 1.01
CPNE1-223ENST00000475146 STAC2Q6ZMT1 411 aa21.36■■□□□ 1.01
CPNE1-223ENST00000475146 LURAP1LQ8IV03 231 aa21.36■■□□□ 1.01
CPNE1-223ENST00000475146 ZNF775Q96BV0 537 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-223ENST00000475146 C6orf203Q9P0P8 240 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-223ENST00000475146 ING1Q9UK53 422 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-223ENST00000475146 ZC3H12DA2A288 527 aaKnown RBP21.35■■□□□ 1.01
CPNE1-223ENST00000475146 ATP8B1O43520 1251 aa21.35■■□□□ 1.01
CPNE1-223ENST00000475146 DNPH1O43598 174 aa21.35■■□□□ 1.01
CPNE1-223ENST00000475146 HRGP04196 525 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms