RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CPN1P15169 458 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF17P17021 662 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PGCP20142 388 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 KLK2P20151 261 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ADH6P28332 368 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 TACR3P29371 465 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PTGS2P35354 604 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SLC1A3P43003 542 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 OR1E2P47887 323 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF41P51814 821 aaPredicted RBP6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PER3P56645 1201 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SELENOWP63302 87 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 MXRA7P84157 204 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 CBFBQ13951 182 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 TRIM25Q14258 630 aaKnown RBP6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ZSWIM7Q19AV6 140 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SPATS1Q496A3 300 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 LRRC23Q53EV4 343 aaPredicted RBP6.28□□□□□ -1.4
LIMD1-204ENST00000474665 GLYATQ6IB77 296 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ENPP6Q6UWR7 440 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 WDR88Q6ZMY6 472 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ATG4DQ86TL0 474 aaPredicted RBP6.28□□□□□ -1.4
LIMD1-204ENST00000474665 CD163Q86VB7 1156 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 CARM1Q86X55 608 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF440Q8IYI8 595 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ARHGAP24Q8N264 748 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 LSMEM1Q8N8F7 131 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 OR52E4Q8NGH9 312 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 C3orf49Q96BT1 292 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 C7orf34Q96L11 122 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 TUBA1CQ9BQE3 449 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PIGQQ9BRB3 760 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SPATA5L1Q9BVQ7 753 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 OR11A1Q9GZK7 315 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PRDM14Q9GZV8 571 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 LRMDAQ9H2I8 198 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 LDAHQ9H6V9 325 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 TMEM185BQ9H7F4 350 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 COQ10BQ9H8M1 238 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 HHATLQ9HCP6 504 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 CTPS2Q9NRF8 586 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SLC7A8Q9UHI5 535 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ACAD8Q9UKU7 415 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PRPF19Q9UMS4 504 aaKnown RBP6.28□□□□□ -1.4
LIMD1-204ENST00000474665 OSGIN2Q9Y236 505 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 CSPG4Q6UVK1 2322 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ACANP16112 2415 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TMED7-TICAM2A0A0A6YYA0 188 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 A0A0B4J2E0 115 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 A0A1B0GX12 115 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM72A0PK05 275 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 H3BML4 177 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 GSTA4O15217 222 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 GYG2O15488 501 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 FMO6PO60774 539 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 NPIPB7O75200 414 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 DNAJC8O75937 253 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 PRKD3O94806 890 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TOXO94900 526 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 PEPDP12955 493 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ME2P23368 584 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ELK4P28324 431 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 SSTR2P30874 369 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 EIF1P41567 113 aaKnown RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CA7P43166 264 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 SLC6A8P48029 635 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CDH12P55289 794 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 RGS8P57771 180 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 RAC1P63000 192 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 LSM11P83369 360 aaKnown RBP eCLIP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 SRYQ05066 204 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 EGR4Q05215 589 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 MERTKQ12866 999 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 BNIP2Q12982 314 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CDSNQ15517 529 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 OR1Q1Q15612 314 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 BCL2A1Q16548 175 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM176BQ3YBM2 270 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 DNAL1Q4LDG9 190 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 WBP2NLQ6ICG8 309 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 LCN8Q6JVE9 175 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CYP2R1Q6VVX0 501 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 LINC00114Q6XXX2 140 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF550Q7Z398 422 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 GRINAQ7Z429 371 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TGIF2LYQ8IUE0 185 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ULK2Q8IYT8 1036 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 LILRA2Q8N149 483 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CADM2Q8N3J6 435 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 VANGL1Q8TAA9 524 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 SARAFQ96BY9 339 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CCDC124Q96CT7 223 aaKnown RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF845Q96IR2 970 aaPredicted RBP6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TPD52L3Q96J77 140 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 HSH2DQ96JZ2 352 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ARL5BQ96KC2 179 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 DMRTA2Q96SC8 542 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 PRSS27Q9BQR3 290 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms